Gene Cpin_2800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2800 
Symbol 
ID8358961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3451254 
End bp3451652 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content46% 
IMG OID644964980 
Producthypothetical protein 
Protein accessionYP_003122480 
Protein GI256421827 
COG category[S] Function unknown 
COG ID[COG3602] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.87316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGTA TTACAGATCT GTCCCAGTTA CTTAAAAACA TGACACCTCA GTTACAGGAG 
GGTGAGTATG TTTTTTGCAC TGTCCCTGAT AATCAGGCGA TTGACATAAA AGAGGTGCTT
GGTAGCTTCC GGGAAGAAGA GGGAATTACA CTGATTCTCT CCCGCGAAAC AGCTGACAGA
CTACAATTAT CCTATACATA CATTGCCGCC TGGATCACCC TGAAAATACA TTCTTCGCTG
TCTGCCGTCG GACTCACCGC CGCTTTCTCC GCTGCACTGG GCCGGGAAGG AATCAGCTGT
AATGTGGTGG CTGCTTTTTA CCACGATCAT ATTTTCGTGG CAAAAGAAGA TGCCGGAAGA
GCGATGGAAG CACTTAAACA ACTCACTATC AACAATTAG
 
Protein sequence
MSGITDLSQL LKNMTPQLQE GEYVFCTVPD NQAIDIKEVL GSFREEEGIT LILSRETADR 
LQLSYTYIAA WITLKIHSSL SAVGLTAAFS AALGREGISC NVVAAFYHDH IFVAKEDAGR
AMEALKQLTI NN