| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2796 |
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| Symbol | |
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| ID | 8358957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3445393 |
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| End bp | 3448812 |
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| Gene Length | 3420 bp |
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| Protein Length | 1139 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644964976 |
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| Product | coagulation factor 5/8 type domain protein |
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| Protein accession | YP_003122476 |
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| Protein GI | 256421823 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5498] Predicted glycosyl hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.151007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCC TGTATCTGTC AGCGATCCTG CTGGCTGCCG CTGCATTGCA AACGCATGCA
CAAACACCCG TTTCTGTTGG CGCCGGAAGC TATGCTTCTT TTCCTCCGGC CTCAGAAAAC
ACAATCGATG GGAATAACGA TGGTAAAGGA GATCTCTATC AGTTTGTCTA TGACCGGCCC
ATTTATGTCG CGGCTGACAA AATGAACAAA CCTATTCCGA CCAATGACTG GTGGACCGAC
CTCGTAGTAT CACAGTATGG AGGCCTGATG TGGGCCTATC CCTTAGTGGC TGATCCTGAG
GACTATGGCG TTAAAATGTA TTATCCGAAC AGCTTTGTCG CCGACGGTTC TAACATTGCC
TATGGCGGTA GTATGATGAT CAAAGCTGCC GGCTATACGC CCTCAAAAGC GATCGCTAAA
GACTGGTCTG ACTGGGGACT GGTAATGTCT CTTCCTGACA GTCTGCACAA CAAAAACATG
GATGTGACCA TGGCACATGG TATTCCATTT ATGTGGCTGG AAACACAGGG TATCAATCCC
GAATTCTCTT TTGACAGAGG CGCATCCTAC CTCACACAAA GCGGTAGCGC CATTCAGTTC
CCTACCAGTA ATTCCTTTGT CATACAGACG GATGGCCGTT ATTTCGGTAT CCACCTGAGT
GGCAGCACGA CTGCAGAATT ACAGGGACAA CAGTATGTCA GGATCGACCT GGGATCTGTA
CAGACCATTA CTAAAGTGAA ACTGAACTGG GAAACCGCCT TCGCAAAAGG TTATGCCATC
CAGGTATCCA GTAATGGTAC TACCTGGAGC ACCGTGGCCT CGGAAGTGAA TGGTAACGGC
GGACTGGATA GTCTGAGTTT CAACACTTCC GGTCGCTATA TCAAACTGGC GCTGGGTGAG
AAAGGCTCAA TCTATGCCTA TTCCCTGTGG GAGATGGAAG TCTTTAATGG CGCTACGCTG
CTCTCACGCA ACAAACCGGT AGAAGTATCT TCAGTAGAAG CTGCCTTTGC CGGCGCCAAT
GTCAACGATG GTAATACCGG TACCCGCTGG GCCTCCGATG GCAGTGCAGC AGAACGACTG
GTACTGAATA CCGGTAATGG TAACGCGTAT TTTGTAGTAT CTGCCCTGCC TGCACCGGGC
GACCTGCCGA CTTACGAGAC CTATGCCTTC AACAAGGTGA CCAACACCGC TGTAGGCTAT
GATTATGATG CCAATGCCGG TAAAGTGTAT GTCAACTGGA ATATTACCAC CGCAAACCTG
AAAGGACAGG CTGCCGGTAA TACAATACAG GGCTTCCTGC CACACCTGTA TCAGAATGCG
GCCAACAGTA TCGCATTCAC AGCGGTCAAC TATGTAACGC CCAGAGGATC TATGAAAACG
GCTATCGGAA AGACCTTCTC ATTCACGTAT GATTTTAATG GTATCCTGCC TACTTATAAT
TCACCTTACC GGAACGCGGC AGATGCCAGT CCTTACAACG CCAACGCCAT GTTTGACATG
CTGACCCGCT TCTCTAAGAA AACCGGTTAT GGCGGCGATA CCTACTGGGG TGGTAAAGAC
CTGGTCAACT ATGCCAAATA CACGCTCATG GCAAAGGAAC TGAATCACCA GGCTTACCAG
TCACTGAAAG CTAAAACAAG AGAGAGCCTG GTCAACTGGC TGACCTATAC CCCGGGTGAA
ACGGAGAAAT TCTTCGCCCG TTATGACAGA TGGGGCGCTA TTGTTGGTTT TAATGAATCT
TATGGTTCTG CCGAATTTAC GGACAATCAT TTCCACTATG GTTACCTGAT CTATGCCTGC
GCATTATATG GTATGACAGA TCCGGATTTC CTGACACAAT ATGGTCCGAT GATCAAACTG
GTGGCTAAAC AATACGCCAA CTGGGACAGA ACGGACAATT TCCTGCCTTT CTTCAGAACA
TTCGATCCAT GGATCGGACA TAGTTATGCG GGCGGTACCA GTTCGTCTAC CGGCAATAAC
CAGGAGTCTA CTTCAGAAGC GATGCAATCA TGGATCGGAC TGTTCCTCCT TGGCGACATG
CTGAATGATG AAGCCATCCG CGATGCCGGT GCTTTCGGTT ATATCAGCGA AGCGTATGCC
ACACTGGAAT ATTGGTTTGA CTGGAAAAAC AGGAACCTGC CGGCAGCCTA TCCGCACAAC
ATAGTAGGCA TTCTTTCCAA TCAGGGTTTT GCTTATGGCA CTTATTTCAG CGCCAGTCCC
GTACACATCC ACGGTATACA ATACCTGCCG GTTAATCCGG GTTTCAAATA CCTGGCGAAG
GATACCACCT GGGCGAAAAG AGAATATAGT GATATGATGA CGGAATCAGC AGCGATAGAC
GGACATACCA GCGAAACTGA TTTTGGTGAC GACTGGGCCC ATGTGGCACT CGGTTTCCGT
CAGTTATTCG ACCCTAAATA TGCAGCTGGT TTCATGGCCA ATAACCTGGC CCTGGCGCCT
ACTGACACCA GGTATATCAT GGATTACGAA GTAGCAGGTA TGACTTACTT CTACACCCAT
GCAAATCAGA ACCTGGGTTT TTTCTCCTTT AACTTCCGTA CCAATTTCCC TTCCAGCAGC
GTATTCGAAA AGAACGGCGC CTTCAGTTAC GCAGTAGCAT ATAATCCTGC TGCAAGCGCA
AAAACCTGTA ATGTGTACAA TGCTGCCGGA GCGATCGTAG CTTCTTTCAA TGTGCCTGCC
AGAACCCTGG TGACCTATCC TACCCTGCCC ACTACCGGAC AACAGCCAAC AGGTTGTTAC
GGTCTGTTAC CGGCCACCGC TACTGCCACT TCCGGTAATG CGGCACTGGC TGTTGATGGT
AGTCTGGGCT CCCGTTGGGA AAGCGCCTTT ACAGATCCGC AGCAACTAAC AGTTGATCTG
GCTGTGATTT CCACCGTGAA TAAGATCAGT ATCTCCTGGG AAGTAGCCAA TGCGAAGAAC
TACACTCTGA CCGGATCTTT AGATGGTAAT ACCTGGTTGC CGATAGCTAC GAAAACCAAT
ATGCCTACGG GCAACAGGAC TGACATCATT GACAACCTGA ATGGCAACTA CCGTTATATC
CGTATGGATG GTACAGCCAG GAATACGCAA TGGGGTTACT CTATTTACGA GCTGGAAGTA
TGTGGTACAG CAGCTACCGG AGCAGCGCCT TTGGTCGCCG ACAATACGCT GGCCAGCAAA
GCTGAACTGA AGACCGATGT AACAGCACCT ATCCTCTATC CGAACCCTGC CAATGACTGG
GTAAAGATCC AGAGTAAAAC GAAAGACATT TACAGTCTGA CGGATCTTCA GGGCAAAATG
ATTCAGACCG GCAAACTGGA TGCGGGTATC AATACCATAG ATATCAGCCG CATTCCAAAA
GGTCTTTATA TCATCAGGAT CAAAGATCAG ACTTTCAAAC TCATCAAATC CAATCAATAA
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| Protein sequence | MKSLYLSAIL LAAAALQTHA QTPVSVGAGS YASFPPASEN TIDGNNDGKG DLYQFVYDRP
IYVAADKMNK PIPTNDWWTD LVVSQYGGLM WAYPLVADPE DYGVKMYYPN SFVADGSNIA
YGGSMMIKAA GYTPSKAIAK DWSDWGLVMS LPDSLHNKNM DVTMAHGIPF MWLETQGINP
EFSFDRGASY LTQSGSAIQF PTSNSFVIQT DGRYFGIHLS GSTTAELQGQ QYVRIDLGSV
QTITKVKLNW ETAFAKGYAI QVSSNGTTWS TVASEVNGNG GLDSLSFNTS GRYIKLALGE
KGSIYAYSLW EMEVFNGATL LSRNKPVEVS SVEAAFAGAN VNDGNTGTRW ASDGSAAERL
VLNTGNGNAY FVVSALPAPG DLPTYETYAF NKVTNTAVGY DYDANAGKVY VNWNITTANL
KGQAAGNTIQ GFLPHLYQNA ANSIAFTAVN YVTPRGSMKT AIGKTFSFTY DFNGILPTYN
SPYRNAADAS PYNANAMFDM LTRFSKKTGY GGDTYWGGKD LVNYAKYTLM AKELNHQAYQ
SLKAKTRESL VNWLTYTPGE TEKFFARYDR WGAIVGFNES YGSAEFTDNH FHYGYLIYAC
ALYGMTDPDF LTQYGPMIKL VAKQYANWDR TDNFLPFFRT FDPWIGHSYA GGTSSSTGNN
QESTSEAMQS WIGLFLLGDM LNDEAIRDAG AFGYISEAYA TLEYWFDWKN RNLPAAYPHN
IVGILSNQGF AYGTYFSASP VHIHGIQYLP VNPGFKYLAK DTTWAKREYS DMMTESAAID
GHTSETDFGD DWAHVALGFR QLFDPKYAAG FMANNLALAP TDTRYIMDYE VAGMTYFYTH
ANQNLGFFSF NFRTNFPSSS VFEKNGAFSY AVAYNPAASA KTCNVYNAAG AIVASFNVPA
RTLVTYPTLP TTGQQPTGCY GLLPATATAT SGNAALAVDG SLGSRWESAF TDPQQLTVDL
AVISTVNKIS ISWEVANAKN YTLTGSLDGN TWLPIATKTN MPTGNRTDII DNLNGNYRYI
RMDGTARNTQ WGYSIYELEV CGTAATGAAP LVADNTLASK AELKTDVTAP ILYPNPANDW
VKIQSKTKDI YSLTDLQGKM IQTGKLDAGI NTIDISRIPK GLYIIRIKDQ TFKLIKSNQ
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