| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2788 |
|---|
| Symbol | |
|---|
| ID | 8358949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 3434024 |
|---|
| End bp | 3434650 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644964968 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003122468 |
|---|
| Protein GI | 256421815 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.156666 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCGTTG TCGAACTACC CGCACATGGA GAAGATACGA CTGCTCCGCA GAACGTAACT
ATTGATGCAT ACAGGGATAA AGTGATCGCG GCAATCAATG CAACGAAACA AAAGGTCGTC
CTCGTAGGAC ACAGTATGGG AGGTGCAGTG ATTACGGCTA CTGCCGAAAA AATACCTGCA
CAGATTGAGA AACTGGTGTA TATAGGGGCG TTTGTACCTG CAAACGGTCA GTCTGTCCTG
GATCTATCCG GTATGGATAA ACAATCGGAA CTGCCGGCTT CACTGATCTT TCCGACACCG
GCTACCATTG CGGTAAAACC AGAGAATCTG ATCGATGTGT TTTGTCAGGA TGGATCAGCT
GCAGTAAAAG AACAGCTGGT CGCGAAATAT CGTGACGAAC CGGCTATCCC GTTCACGAAT
AAGGCGGTTG TTACAGCGGC CAACTTTGGT TCAGTTGACG AGTATTATAT CCACACCAAT
CAGGATCACG CGATCGGTAT AGATCTGCAA AATCAGATGG CGGCTGCGGC AGGTATCAAA
AATATATATG CGCTCAATAC AGGACATAGT CCTTTTCTGT CCAAACCGGA CTCAGTAAGT
ACTGTATTGC TGAAAATCAT AGAATAA
|
|---|
| Protein sequence | MVVVELPAHG EDTTAPQNVT IDAYRDKVIA AINATKQKVV LVGHSMGGAV ITATAEKIPA
QIEKLVYIGA FVPANGQSVL DLSGMDKQSE LPASLIFPTP ATIAVKPENL IDVFCQDGSA
AVKEQLVAKY RDEPAIPFTN KAVVTAANFG SVDEYYIHTN QDHAIGIDLQ NQMAAAAGIK
NIYALNTGHS PFLSKPDSVS TVLLKIIE
|
|---|
| |