| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2785 |
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| Symbol | |
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| ID | 8358946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3430445 |
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| End bp | 3431869 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644964965 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_003122465 |
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| Protein GI | 256421812 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0347137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0590439 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTAA AATATATTCG CCTTTCAATC GTCTCTACAC TTATAGTTGC GGGATTGGTA
GCATGTCGGG TGGGTCGCAA TTACCAACGA CCCTCCCTGG CACTGCCGGC TCAGTACAAT
GATACAGTGT CGGCAGCAAG TGCTGACAGC AGCATTGCGA CTTTGGAATG GAAACAGTTT
TTTACAGATA CGACATTACA GGGACTGATA GGAAGGGCGC TGAGCGGGAA CTATGATTTG
CAACTGGCAA TTAAACGCAT AGAAACGGCA CAGGCATACT TAAAACAAGC GAAATTAGGC
TGGCTGCCAA CGGTAAATCT CCAGGCAGCA GCGTCTACTT CCATCCCTTC AAAGAATAGT
TTGAACGGAA CCAGTCTGAA TACTTTCCTG GGTACTGAGC ATATCGAAGA CTACAGTCTG
AATGCCGGCC TTTCCTGGGA GATCGATGTA TGGGGTAAGA TCAAACGTCG CAAGGAAGCG
GCACTGGCCA GCTACCTCGG TACATTTGAA GGCATGCATG CGGTACAGAC AGGATTGGTG
GCAGATATTG CCAACAGTTA TTATAACCTG CTGATGCTGG ATGCACAGCT GGAAATCGCC
AGGAGCAACG TATTACTGAG TGATACTATC GTACAGATGA TCCGTTTGCA GAAGACGGCC
GGCGAAACCA CCGAACTGGC GGTACAACAG GCAGAGGCAC AACGTCAGAC AGCTGCTTTA
CTGATTCCGC AGCTGGAACA GGCAAAAGCG ATCGAACAGA ATACCCTGCG TATACTGGCC
GGAGAACTGC CTGGTACGGT GGCATATAGT ACGACGCTGA TCACCACACC ACTCCGCGAA
CTGATGCCTG CCGGCGTACC TGCAGCACTG CTGAGTAACA GACCGGATGT AAAAGAACAG
GAAATGGCGC TGGTAGCTGC GAATGCAGAA GTAGGCGTAG CACAGGCCAG TATGTATCCG
GCCTTGAACA TTACGGCAAG TGGCGGCGTG AATGCTTTTA AAGCAAGCGA CTGGTTTACA
TTACCGGCTT CGCTGTTTGG TATGGTAGCA GGAAGTCTTA CTCAACCGGT GTTTCAGCGT
GGACAACTCA AAACGAACCT TGAAGTAGCA AAGATTCAGC GTGAAGAAGC GGTGATCAGG
TTCAGACAGG TAGCGCTGAA TGCGATCGGA GAGGTGTCCA ACTCCCTGGT GAGACTGGAT
AAGCTGAAAG AGCAGCAGGT AATCGCCTCT AACCAGGTAA CTACACTGGC GCTGGCTACT
TCTCAGGCAA GAATGCTGTT CCGCAGTGGC ATGGCTAACT ACCTGGATGT GATCACTGCG
CAGGGCCGGT CGTTACAGGC ATCACTCACA CAGGCTGATA TTACCCGTCA GCAACTGAGC
GCTTCTGTTG AATTATACAG GAGTCTGGGA GGAGGTTGGA AATAG
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| Protein sequence | MTLKYIRLSI VSTLIVAGLV ACRVGRNYQR PSLALPAQYN DTVSAASADS SIATLEWKQF
FTDTTLQGLI GRALSGNYDL QLAIKRIETA QAYLKQAKLG WLPTVNLQAA ASTSIPSKNS
LNGTSLNTFL GTEHIEDYSL NAGLSWEIDV WGKIKRRKEA ALASYLGTFE GMHAVQTGLV
ADIANSYYNL LMLDAQLEIA RSNVLLSDTI VQMIRLQKTA GETTELAVQQ AEAQRQTAAL
LIPQLEQAKA IEQNTLRILA GELPGTVAYS TTLITTPLRE LMPAGVPAAL LSNRPDVKEQ
EMALVAANAE VGVAQASMYP ALNITASGGV NAFKASDWFT LPASLFGMVA GSLTQPVFQR
GQLKTNLEVA KIQREEAVIR FRQVALNAIG EVSNSLVRLD KLKEQQVIAS NQVTTLALAT
SQARMLFRSG MANYLDVITA QGRSLQASLT QADITRQQLS ASVELYRSLG GGWK
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