| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2776 |
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| Symbol | |
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| ID | 8358937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3412869 |
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| End bp | 3418973 |
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| Gene Length | 6105 bp |
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| Protein Length | 2034 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644964956 |
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| Product | Fibronectin type III domain protein |
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| Protein accession | YP_003122456 |
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| Protein GI | 256421803 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02542] Bacteroides forsythus 147-residue repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0749154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00396839 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTCGTA TATTCCGATA CCTGCTTTGC CTGCTGACGC TGCTCACGGG CTTCTATCAT
GCTGATGCCC AGCAATACCC TGTCACAGCC AGTACGCAGA TCGTACCGCC TTATAGTGTT
TATCTGCCGG ATTACGCAGT GCCGGGTAGT GATAAATTAC GTGTGATACT CGTACAGAAT
GACCTGACCG TACCCAGTTA TGATATCAGG CTACAGGTGA CTGTAGAGCA GAATGGCAGT
GTGATCATGC GATCGTCGCC GAACTTTATT CCCAAACCTC TGACTTTAAG TCCGGGTATT
CCTACCATCA TCGGTGGTAT CGATCTGGCG GACTATCTCA ATCCGGCAAA TATCCAGTAT
AGCGGCGGTT TCAGCCGGGA AGTATACGAG AAGACCCGTT CCTTGCCGGA AGGGGCTTAC
CGCATTTCAT TTACAGCATA TGACTATCGT CGTCCACAGG TACAGGTCAG TAACACAGGG
GCCAATGTCT TCTTCTTCCG GAAAAATGAT CCGCCTTTAC TGAACCTTCC TATCTGTAAC
AGCCGTGTGG AAAAACTGGA TCCGCAGTTC CTGACATTCA ACTGGAGCAG CCGTAATTCC
CCTAGTCCTT TACCCGGTAG TGGTACAGAA TATGTCTTCT CCCTGTATGA AGTAAGACCG
GCAGGCAGCA ATCCTGATTA TATCGTCAGA AGCGCTAAAC CGATCTATAC ACTGGTGACA
GAGATGAATA CCATTGTATA TGGTCCGGGA GAGCCGCAGC TGAGAGATAG TATGCAGTAT
GTATGGACAG TGCAGGCACG GGATAAGAGC GGCAGGGATA TGTTCAGCAA TAACGGGCTG
AGTCTGAGTT GCACTTTCAA TTACCTGGGA AATAATCCTT TTACTCAAAG AAATATACCG
AAACCTGTAT TAGGAGGGCG CAGCACAGGA CAGCGCAGCG TACGTTTCAG CTGGCCACTG
GCAGATGCAG GCTACCAGGT GGAAACCTAT CGTTTGCAAT ACCGTGCAGC TAAAACAGGC
AGTACAGAGT TTGACTGGCA GACGCAGGAA TCAGCAGGAG ATACCGCATT TACGGCGAAT
GGCTTAGAAC CGGGTCGTGC CTATGAAGGT AGGTTACAAT GGAAAATAGA AGGTATCTAT
GGACCATTGA GTGATGTTGT GACACTGAAG ACCGACTCCG CTAAAACCTT CGTATGTGGC
GATCCTGCAT TGATGACAGC ACCGGCTAAT AAAGAGCCAT TGGCAAGCGC ACATGTGGGC
AGTATTTTCC GCGTAGGCAA CTACGATGTG ATACTGACAG AAGTAAGTGG CAGTGCTGGT
AAATTCACCG GTAAAGGCCG TGTGATTACC CTGGGCTTTG GTATCGGTTT GCAGATGGAG
TTTAAAGATG TAACTGTCAA TACGGATATG GTCGTGACAG GAGGAGAGAT GCACGCCGTG
ACCGAGGGTA TCGATAAATT CATCCAGGAT AAAGTAGATG AACAACGCGG TGGTAATGAT
GTCGGTAAGG TGAAAACAGG AGATATCGTT CCTGATATCA CGACAAAACT GAAGATCTTC
TCTCCGGCTA ATATTAAAGT AAATGTAGAC GCAGGTACCA TTACGCTGAA AGATAGTGAG
ACGGGTAAAG AAGAAGTTAT CAACTATAAA GACAAAGGTA AGACCCTGCC TTTGGTGCTG
GAAGATGCAG ATGGCAACCT GTATAATATT GATAAAGGAG GTAAGGTAAC GTCCGCTGGT
AAGCGTGATA CTTCACTGAC GAAAGAAGTC CTGGCATCAT TGAAAACACT GAACCTGAGC
AAAGGTACAG TGACATTCTC CGCATCGGGT GATAATGCAT ATGCATTTGA TGAATGGAAA
GATAGCTATA GCGGTAAATC TGTATTAGAG AATAAATATG AATCCCTGGC AGATGGTAAG
TACCGCGTAA GCGCGAAAGC AATTGTACCA GGTGTGCAGG AAGAACTGGT GGCGATACTC
AAGGGCGCTG GCGCTGATAT CACAAGTTCC AAGTTGAAAT TTGTGACAGG TAAAGGCATT
GTCCTGGAGT CAAAAGACCT GGGTGATGCT AAATACTCCG TGAAAGTAAC TGGTGGTCCT
GGTGGTGATG CCCAGGAAGT ATATGCGGCT TATCCTGATG GAAAAGGCGG GTATATCAGT
ATGGGTAAAC TGCTGGTGGC AAGTTATACG CCATTGCAGA AGACTGTTGT ACTGATACCA
ATCGGTGAGG CAGTTGTCAA TAAAGAAGTA TTACTGGATA GCCTGCAACA CATCTACGGA
AAACTGGGTA TTAACTACAC GGTTGAAGTG GATGAGTCTT TCAAAAATAA CAAAGACTGG
GATAGCAATC ATGACAACGT ATTGCAGGAC AGAGGTAGCG CATTCCTGAG CAACAACTTT
ACAGGTGAAG AGAAAATACT GAAGAAACTG TATAAGAAAA GGACAAAACT CAGCGATGAT
GCCGTGTACC TGTTTGTTGT AGATGAAGTG GCTTTAGCTG ACGGAGATCT GTTAGGTAAA
ATGCCGCGTA ATAGCCAGTT TGGTTTCATC TTCACAAAGG ATGCTGCAAG AGAGGCCGTC
GTGCGTACCG TACTACATGA GATCGGACAT GGAGACTATA CACTGGAACA TACATTCGGT
GAAGGTATCG GACTGGAGAA ACGGACCACG GATAACCTGA TGGATTATAG CGGTGGATAC
AGACTGTTGA AATACCAGTG GGATATCCTG CATGATCCGG GCAGTGTATG GGGCATATTT
GAAGATGATG CGGATAGTGA AAACTACTTT GGTGTAAATA TCAGTAAGAT ATTCCTGAAC
AAGGATAAGA AGACCGTCTC CTTCCTGACA CCTTCTGCAA CCGTACTGGC AGTACCATGG
GAAAAGCTGG GTAAGGTGGA GTTCCAGTAT GGAGCTGTCT ATAAATCAGC CGCCACAGAT
CAGCTGAATT TCGGTCCCGA TCTTACAGTA GGGGCAGTAA GAAGTTTTGA ACTGAAAGAT
ACCGGCAATG CAGTACAACG TTATCTGTAT TATGATAATA CCGGTACGTA CAAAAGCGAA
TCAACGGGCA CCGCGTTCCA GCAGGAAGCT GCGGAAGACA TGGTTGACGG ATTTATCTAT
CCGTTGCAGT GCGATGGCAA GATGAGGATG TATAAGTTCA CACGCAATAC TATTCCCTTA
TATAAAGCAG GAGATCCGAT CAGGAAGTTT GTGGACTTTG CAGAAACATT CCGGCCATTT
GCGGTCAACA CGATCATGAA TGATCCGCTG TCGTTTATTA CTTTAAGTCA GGAGTTACCT
GCTGATGTGA ACAACAGGTG TCCATACTGT ATTGCTACGA CTACCGTAAG CATGATGAAA
AATCATTGTG CTGGTGCTGA ATATCTCTGG TTGGATAAGA TCGCACAGGT ACGGCAGGTA
TATCCCGAAT ACTTCACCCG GTTTACACAG CCGGAAGTGG TAGTAGAAGA GAGCGTAACC
GGCGGCAGAC GAGAGAAGCC CGGTAACTGG GAAGTACCGC TGAGTTTTGA TATGCCATTG
TCAACGACGC ATTATTCTGA CTCAAGACCG GAAAGAGCGA CAGATTATCC ATGGGGTAAA
TTACTGGCAG ATAGCGCTGA GATAAAAACG GCCTATACAG GTGATAAAGT CCGGTTCTAT
AAGAAGTTCT ACACGGAATT TGTGAATTAT ATCACTGTCA CTGCCATAGC GACCGATAAT
AAGTTCTGGG ATACGTTGAC AAGAAGAGCT TCTGTTTATG AAGTATTCCC GCATGTCAGG
GACGAGCCTT ATATACATCT GCAGACGGTA GCTGTTAATA AGAGAGGCAT CGCGCTGGAA
ATTATCACAA AGCTATACGA GAACAGTACC ACTGATTTTC CACATGAGGA CGAGGTATAC
CTGAAGCTCC TTACCAGCTT TAAGGGTGTG GCAGATCAGA CGGCCTTGCT GAAATATATA
GAGGATAGCA TCTTGTTCAG TAACATCTAT AATCCATTCA ACAGGTTCCT GATGCCTGCA
AAGATGCAGA TAGCGACCAT GATGACTTAT AGCAACATGA TCACTAACAC AGGGCACTGT
AATTATCTGA TAGCGGAGAA GGCGGAACAG ATCGATCATC CTGATATTGT GGCGCAACTG
GAAGGAGATA TGCTGCAGTT TAAGAATGCC GGCATTGATT TCCCTGAAGG TAATAAGATC
CTCATTGATG AAAAGCCATA TAACTATAAT GATATCGTAT CTGTACAGGT AGCAGGTTCC
TTCACCATCA AAATCAACGG CGTTGATTCA ACGTTCGCAA AGGGTACCAT TCTGAATATA
CCTGCGATAC AGGTTGGCTT AATGTCAGAG ATCAATACCG CGGACGTAGC AGCGAAAACG
GCATGGCTGG CGTTTGATGT CGGCACAATG GTCATCGGTA TCGGACAAGC CAAAATCCTC
TTTACGGCAG GTAATTATGT CAGAAAGTCT ATTGTGGCGC TTGATCTGCT GGGCTCTACA
GCGGGTATCG GTTTACAGTT GCTGGATGAA GATGCGATCT CTCCACAACT GAGAACGAGT
CTTCAGATTG CGTCTTTCGT TTGTTCTTTG CCAAGTATGG CATTGGCGAT ACCTAGAATT
GAACGGAAGG TAAGTGAACT GGATGCCGTA TTGAATACGA AATATGGTAA GAGTGGACTG
AGTGCAAAAC AGTTAAGAGA GAAAGCGGCG CTGGAACGTA TAAGACAGGA ATTATCTGCA
GCGGCTCATT TACCGGAAGT GGCAGAAGAT GCAGCTGAGA TCAGCAGAAG GGCTGTAACA
ATCAGTAAAG AGGAGGATAT TAACAAAGTA TTATCCTGGT TAAATACTGC CGAAGATGCG
GATCCAAATA TTTATCTGGC GGTTCATGCG GTCGGTGGAG ATTTCAAGGT AATGCATGGC
GGTAAAGAGG TGATAATGGA CCATCGTTCC CTCGCCAACT GGATCCTTGC AAATGAAGGG
CTGTTCCCGG CCAATAAACA ACTGGTATTA TTATCCTGTG GTGATATTGA AACCGCACAG
CACCTGAGCC GTAAATTAAA ACGTAGTGTG GTTGCTAATG ATGGTCCGGT AAGGGTATAC
TCTAACGGTG TGATTGAGGC AGATAACAGT TTCAGGTATA TCGATGAAGC AGGGTATATA
GATAATAGTA CAAGTGTTGT GGTAGGCAAA CAGGCCGTGC CGCCGGCATC TGATAAAGAT
GTGGTAACAC TGGGCCTAAA AGCAGTCAAA GCAACTACAG TGAGTGAATT GGTAGTTGAA
TTTAAACGTA TATTTGGCAT TGGTAGTGAA CTGGCACTGA GGCTATCAAA AAATGCTGAT
TTTGTAAAGG CATATCAGGA GAATGCAAGG ATTTTACAGG TGATAGCAAA TGCCCTGCCC
GAAGTAGAGG TTACAGTAAA AGGTAAAAAG TTTGCCACTT ACCGGGAAGC CTTACTGACA
GGTTGTGCAG ATGATCCGAA ATTATTTACT GTAATGAATT CCGCTATTGA AGAAGCGATC
GAGGGTGTCA AAAATGCAGA GGATGTGAAA CCATTTGTAG AATATGCGGC CACCCGAAGA
AAAATGACGG AGTACATGAA TAAAAACGGA GATTTTAATA AGGATTATTT TGCGAATGCC
GTACTTAACT CCGCCGTATT CCGCTATGCA GCCCTGGATG CCAAAGGCTG GGGTAAAATA
GACGAAGCTA GAAAAGCATT TACTATCCAT CCGAATTCGA ATGTACTGGT AGTTGAGCGC
CGGATGAAAA ATGGCAAACC GATACAGGAA GTGTCGCATA GCGGAGGCCG CACCGCCGAC
AGAACTAGCG AGAGCATCGA GGGTACTATA AAGAAAGTAA ACGAGGATAA TAAGCATTTT
GATCAGTTTA CAGTTGGGGG CCCTCGTATT CAGGATTCTG AATCGAAGTA TTTTGAAGAT
CTTCTGGAGA AACTAGAGAA AAAAGAATTA AGGGCGGAAG ATATAGAGGA GCTGATTTTG
TATACTGAAC GTCCGGTTTG TCCATCATGT CTGAATGTTA TCAGAGATTT CAAGAAAAGA
TTTAATATTG AGATTACTGT TTACGAAGGA AAATACAAGA GATAA
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| Protein sequence | MPRIFRYLLC LLTLLTGFYH ADAQQYPVTA STQIVPPYSV YLPDYAVPGS DKLRVILVQN
DLTVPSYDIR LQVTVEQNGS VIMRSSPNFI PKPLTLSPGI PTIIGGIDLA DYLNPANIQY
SGGFSREVYE KTRSLPEGAY RISFTAYDYR RPQVQVSNTG ANVFFFRKND PPLLNLPICN
SRVEKLDPQF LTFNWSSRNS PSPLPGSGTE YVFSLYEVRP AGSNPDYIVR SAKPIYTLVT
EMNTIVYGPG EPQLRDSMQY VWTVQARDKS GRDMFSNNGL SLSCTFNYLG NNPFTQRNIP
KPVLGGRSTG QRSVRFSWPL ADAGYQVETY RLQYRAAKTG STEFDWQTQE SAGDTAFTAN
GLEPGRAYEG RLQWKIEGIY GPLSDVVTLK TDSAKTFVCG DPALMTAPAN KEPLASAHVG
SIFRVGNYDV ILTEVSGSAG KFTGKGRVIT LGFGIGLQME FKDVTVNTDM VVTGGEMHAV
TEGIDKFIQD KVDEQRGGND VGKVKTGDIV PDITTKLKIF SPANIKVNVD AGTITLKDSE
TGKEEVINYK DKGKTLPLVL EDADGNLYNI DKGGKVTSAG KRDTSLTKEV LASLKTLNLS
KGTVTFSASG DNAYAFDEWK DSYSGKSVLE NKYESLADGK YRVSAKAIVP GVQEELVAIL
KGAGADITSS KLKFVTGKGI VLESKDLGDA KYSVKVTGGP GGDAQEVYAA YPDGKGGYIS
MGKLLVASYT PLQKTVVLIP IGEAVVNKEV LLDSLQHIYG KLGINYTVEV DESFKNNKDW
DSNHDNVLQD RGSAFLSNNF TGEEKILKKL YKKRTKLSDD AVYLFVVDEV ALADGDLLGK
MPRNSQFGFI FTKDAAREAV VRTVLHEIGH GDYTLEHTFG EGIGLEKRTT DNLMDYSGGY
RLLKYQWDIL HDPGSVWGIF EDDADSENYF GVNISKIFLN KDKKTVSFLT PSATVLAVPW
EKLGKVEFQY GAVYKSAATD QLNFGPDLTV GAVRSFELKD TGNAVQRYLY YDNTGTYKSE
STGTAFQQEA AEDMVDGFIY PLQCDGKMRM YKFTRNTIPL YKAGDPIRKF VDFAETFRPF
AVNTIMNDPL SFITLSQELP ADVNNRCPYC IATTTVSMMK NHCAGAEYLW LDKIAQVRQV
YPEYFTRFTQ PEVVVEESVT GGRREKPGNW EVPLSFDMPL STTHYSDSRP ERATDYPWGK
LLADSAEIKT AYTGDKVRFY KKFYTEFVNY ITVTAIATDN KFWDTLTRRA SVYEVFPHVR
DEPYIHLQTV AVNKRGIALE IITKLYENST TDFPHEDEVY LKLLTSFKGV ADQTALLKYI
EDSILFSNIY NPFNRFLMPA KMQIATMMTY SNMITNTGHC NYLIAEKAEQ IDHPDIVAQL
EGDMLQFKNA GIDFPEGNKI LIDEKPYNYN DIVSVQVAGS FTIKINGVDS TFAKGTILNI
PAIQVGLMSE INTADVAAKT AWLAFDVGTM VIGIGQAKIL FTAGNYVRKS IVALDLLGST
AGIGLQLLDE DAISPQLRTS LQIASFVCSL PSMALAIPRI ERKVSELDAV LNTKYGKSGL
SAKQLREKAA LERIRQELSA AAHLPEVAED AAEISRRAVT ISKEEDINKV LSWLNTAEDA
DPNIYLAVHA VGGDFKVMHG GKEVIMDHRS LANWILANEG LFPANKQLVL LSCGDIETAQ
HLSRKLKRSV VANDGPVRVY SNGVIEADNS FRYIDEAGYI DNSTSVVVGK QAVPPASDKD
VVTLGLKAVK ATTVSELVVE FKRIFGIGSE LALRLSKNAD FVKAYQENAR ILQVIANALP
EVEVTVKGKK FATYREALLT GCADDPKLFT VMNSAIEEAI EGVKNAEDVK PFVEYAATRR
KMTEYMNKNG DFNKDYFANA VLNSAVFRYA ALDAKGWGKI DEARKAFTIH PNSNVLVVER
RMKNGKPIQE VSHSGGRTAD RTSESIEGTI KKVNEDNKHF DQFTVGGPRI QDSESKYFED
LLEKLEKKEL RAEDIEELIL YTERPVCPSC LNVIRDFKKR FNIEITVYEG KYKR
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