Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2774 |
Symbol | |
ID | 8358935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3405629 |
End bp | 3411043 |
Gene Length | 5415 bp |
Protein Length | 1804 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644964954 |
Product | hypothetical protein |
Protein accession | YP_003122454 |
Protein GI | 256421801 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.496989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00218056 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATTA GCAAAATACT TACCTGGTTG TTCTGTACAA CCATCTTAAT AGCAGGAAAG GTGCAGCCGT TGGCTGCGCA GCAACAGACA ATGTCCACCT CCAGCTGGTT GTTTGCCCAG ATTCAGGGTT CTCCTCCGCC GAATAATACC ACTGTGAAGT ACACAGGGTA TACAACGGAC CAGGGTCTGG GAGGAACGCC ACTTGGTCCC GGACTGGTAG CCGCTGCAGC CATCAAAGTA GCAGGCCCCT ATCAGCTTAA TTTTCCCAAT GGATCTGGCC CCGGTATATA TACCAATGTC ATTTATCCAT TTGCCTTTGA AGGAAATCAA AGAGAAGATC TGCCTTTTGT AGGACCGTAT ACTAACTATA ATTATGGTAG CGGCACAATG ACAGCCAGAT GGTTGTATGC AATGGTGGCG CCCAACACTG TTTCTACTTA TGTGAGTACA GTGTGTGGAA ATGGCTTTTT ATCGCTTATA TCCGACTATA ACGGATATCT GTTTAATGAT AATATAGTGA CCTGTTCTGT CGTGTATCAA TACAATATCC TGAATACCGG AACAGACAAC TGGAAAAATC TCGATTCAAC GAGTGTGTAT GGTGTGTCTT ATAGCATGGG CTTCAACGTA AGACAAAAGA TCCCGGAATT ATCTGAAGGT TCAAAGTATG TACGCTTCCG CTGTCGCGCC AAAGCGGTAT ACAGCGGCAG ACCACAATAC TCTCCCTGGT CGGCAACGCC GGCTAGCTAT GTTGAGATAT TATCACCTCC GCCGATCGTG AATAGCTCCA TGGTGCAGAA AGTAATGACC TGCCTGGGCG AATCAAATGG TAGCGTTAGA GTACCTGCGG GCGCTTTGAG CGGCCCTAAC TCTACTATGC GCTGGATACT CAGACCCGGT ACTGTAACAG ATCCATGTTT CCCCGGAACG AACTCCAACT GTGGTAATGG TATCGCTCAG AGTGATGGCA CTGTCCCGCT GGCCACAGAA ATCTACTACG ATAAACTGAC AGAAGGTAAC TATACACTGT GGTTTGTCAA CCCCGGACAG GAAGCAAGAA GTTGCTTTTC CAGTTACCCT TTTACCGTAA GTTCTTTTCC AGTCGTGACA TTGACAGAAG ATGTGTCAGC ACACAAGAAT ATCAGTTGTT ATAATGCGAA TAATGGTCAG CTGACGGCAA TCGCCACTGG AGGAGATCCT GCGGGCCAGT ACCTGTTTAC ATTACTGCAT AGTGATAATA CGGTTTATAT CCCCGAACAG CCGGGTAACG GCGCGACGAT GACATGGAAT AACCTGCCGT CAGGTTTTTA CCGCCTGCGG GTCAGAAATA ATAAATGTGG TGAGATCAAG ACAAGCGCCG ATATTGAACT GACACAACCG AAGCAGGTGA CCGGTGATAT CTTTATTGCC GAACCAACCT GTAATGTGCC AGGTAATGGT AGCATTACCC TCACCGCTAA TGCAACAGGC GTATCGAAAT TCAGATACGA TCTGTATAAG AACGGCGAAA TACAACAACA ATCCGGTTCC GTGACGGAGA GTACTTATAC CTTCTCCGGA CTAACAGGTG GCGACTATAT CGTACAACTC TTTAATGATG ATATAGCGGG TTGTCCTCCA TGGAATGGGG ATACTACTTT GATTACACCC GCTCCATTGA CATTACAGAT GAACGCACGT GATTCTGTAA GTTGTAATGG CGGTAGTGAT GGCAGACTGG AATTTTCCGC TACTGGTGGA AGTGGTGTTT ATACATTCAC ATTGAGTGGC GCTGCTATCG GTACACGTAC CAATGCCAAC GGAATTTTCA ATAACCTTCC TGCAGGTAAC TATACCATTC AGTTAACAAA CCAGGCCGCC GGTTGTAATG ACCAGATCAG CCAACAGGTA GATATCTTCC AGCGTAGTCC GTTGAGCGTA CAGTTGCAAT CTACGCTGAT CTCCTGCTTT GAGGCGGAAG ATGGCACGAT AAAAGCAACC GTAAACGGTG GATCCGGTTC CTATAAATAT ACCTGGCAGC AACTGAAGAA TAACATTTGG GCCGGTAACA GCTTCTGGTT TGAAACAGAT ACGAAGATTG AAGCATTGCC TGCCGGTACT TACCGCGTTA TCATCACGGA TGCGAAAGCG CCTGCCTGTG CAATCACTTC AGATGAAATA GTGATCAACG ATGTGACCGA ACTGAAGATC ACAGATATCA CAGTAACAGA TGCCGTATGT CTGGCAGATG GTGTGCATAT CAGTATGAGC GCCAGCGGCG GTACCGGTGC ATATACCTAT TCGTGGTCGA CAGACGGTGG TACGACTTAT ACGCCGTTCA CCGCAGCCAC TACTTTTACA ACAACAGCTA CTTATCAGTT ACAGGTAAAA GATGGCAATG GTTGTAAAAC AGACGCCGAT AATACCTATA ATATAGTACT CCCTGCTGCG GCACTGGACT TCACCATGGC CGTATCTGAT TATCATGGAT TCAATATATC CTGTAAAGAT GCCAGTGACG GAAAGATCAC TGTCAATGCT CAGGGCGGAA ATGGTGGTAG CTATACTGGT TACCAGTACA GCATCAATGG TGCTACTTAT CAATCCGATG CTGTCTTCAA CAACCTGGTA GCCGGTACTT ATACGATCAA GGTAAAAGAT GCCAGAGGTT GTCAGATCAC GAAGACAGTC ACCCTCTTAC AGCCAGCTAT CGCGGTAACG CTCACAAAGA GCGATATCTT ATGTAACGGC GCTGCTACAG GTACACTGAG GACCGACATC ACAGGTGGCG CTGCTCCTTA TATACTCAAA GTAAACGGTA CGGAAGTAAC AGCAGGCACA ATGATGCAAC AGTTACCGGC TGGTAATTAT GCGATTCATA TCACAGATGC AAATGGTTGT ACAAAAGATA CTGCTATCAG CATCGTGTAT ACTTATCCTG CGCTGACGAT TAATAGTGCA GTAGTGACTG ATATGGTGTG TTACGGTACG ACAGGGCATA TCAGCATTGA TGCTGCCGGT GGTGATGGTA TACACGCTTT CAGTCTCAGT ACGGACAACT GGACAAACGC GGCCAGCTAT ACCAGTGGCG CCGGACTCAC AGCGGGTAAT TACGCTTTAC GTGTTACCGA CGGACAAGGT TGTATCACCA CTTACCCTAC CGCATTGCTG ATCACCACAC CAACTGCGCC ATTGGCATTG ACAGCGACAT TATCTGATTA TAACGGATTT AATATCTCCT GTAACGGCGG TAGTAATGCC TTCGCCGATA TCAAGGCTAC TGGCGGTAAC GGCGCCAATT ATACCGGATA CACCTATGCA ATTGACAACG GTGCGTATAC TTCAACACCA CTGATACAAG GTATCAATGC CGGTACGCAT ACATTACATG TGAAAGACGG CAGAGGTTGC ATCGTTTCCC GGAATTATCA GTTTACACAA TCCGCCCTGG CTATTGACCT GACCCTGGCA AGTAAACAGG ACGTGCCTTG TGCCTACGTA CCTGCCGGTA GTATCACGGT AGCAGGTAGC GGTGGCGCAG GTGGCTTACA ATACAGTATT GATAATAGCC ACTGGCAGAC CAGCACTACT TTCAGTAACC TCGTAGGAGG TACTTATACG ATCTGGGTAA AAGACCTCAA CAGCTGTGGT AAATCCATTA CAGTGAGCCT TGTACCTGTT AATGCCCCTA TAGTGATCGA CAATATTACC GTGAATGACA TCGTATGCTA TGGACAGAAA GGAACGATAC AGGTACAGGC GCATGGCGGT ACCGGTATCC TCACCAACGA ATATGCCTGG AATGGCGGTG CTTACAATAA TACATTTACC AATACCACGC AATTAGGCGA TGGTGCTTAT ACTATCCGTG TAAAAGATGC TGCCGGATGT TACTCTCCGG TATCTGCTGT GAAACAGATA TCTGCACCAG CCATAGCACT GAATACGGTA GTCACTACCT CCGCCTATAA CGGTGTACAG ATCTCCTGTA ATGGTCTGAG TGATGGTAGT ATCAGCCTGG CAACCAACGG TGGGAACGGT GGTAATTACA CCGGGTATAC TTATAGTGTC AATAACAGTG CATACACTGC TACAAATAGT TATAATAATC TGCCGGCAGG CAACTACAAC ATTAAAATAG CAGATGGCCG TGGTTGTGTG CTTAATCGCC AGGTGGTACT GCAACAACCT GCCGCATTGA AATTGGCGGT CAGCAGTAAA GAAGATCTTC CATGTGGTGC AAACCCTACT GGTAAGATTC ATTTACAGGC AAGTGGAGGT ACCACACCTT ATGCCTTTGC GATGAATAAT GGTAACTGGC AGTCAGCAGC CTTATTTGAA GCATTACCTG CCAACACATA TGCATTGTCT GTCAAAGACC TGAATGGTTG CAGGGTGAAT ATCACACAGG AGATCAAAGC TATGTATCCA CCGATTGACG CCACTGCCGA TATTACCAAC GTTAGCTGTA ATGCGCTTTC AGATGCAAAG CTCGTGATGC ATGTAACAGG TGGCGATGGT CGCTATACCT ACGAATGGAA TGCTGGGGGG GGGTCAGGTA GTACATTACA ACAGATTCCT GCCGGTACTT ATACCGTAAA GGTGACTGAT GGTGCGGGTT GTTTCCGCAC ATTCACACAT GAGGTGACGC AACCGGATAA ACTGACGCTG GAAGTAACAG CGCCTCCTAT CTGTGACGGA CTGAGCGACG GTACGATCGA TGCAGCTGTA GACGGTGGCA CTTTACCATA TAAATATTCG CTCAACCAGA GCAACTGGCT TACAACGGGT GCATTTACCC AAATGGACGC TGGTCAGTAC AACATGAGCG TACAGGACGC ACATGGTTGT GAGGTGGTGC AAAACTTTGA GATCGGTAAG GTGAATGTCA AACCAGATAT CAACTTCCTG GTGGCTTCCC GTAAGAATGC GATGGATACC CTGATCATCA GGGAAATCAG TCTGCCGGCG CCGGATCATG TTCGCTGGAA CTATTCTCCT GCTGCCACTT TACTGGGGTA TGAAAACGAT GGTACGCCAT TGATTAAGTT CTCTGCACCG GGCACTTACT GGGTGGAGAT GACGGCTACT TTCGGAGAGT GTACCTATAC AGAAAGAAAA GACCTGATCA TCAGTCCGTA CGATCCGCTG TCTGGTCCGG GTTACACTGT ACCTGTCAGT GTTATTGATA CGGTCATGTT GTCACCGAAT CCGAACAACG GTTATTTCAG ATTCACCGTA AAGCTGAACC GCAAACAGCA GGTCGTGGCT TATGTATATG ATATGAACGG TATCATTTCT GCAAAACGTC AATATGCGCC AGCTTTACAG ATAGACGATA ATATTACTGT CGGTGGTACC GCTTCCGGCA CATTCATCCT GAGGATCATC ACTGAAAGCG AAAGCAGGGA TGTCCGGTTT ATTATATCCC GATAA
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Protein sequence | MKISKILTWL FCTTILIAGK VQPLAAQQQT MSTSSWLFAQ IQGSPPPNNT TVKYTGYTTD QGLGGTPLGP GLVAAAAIKV AGPYQLNFPN GSGPGIYTNV IYPFAFEGNQ REDLPFVGPY TNYNYGSGTM TARWLYAMVA PNTVSTYVST VCGNGFLSLI SDYNGYLFND NIVTCSVVYQ YNILNTGTDN WKNLDSTSVY GVSYSMGFNV RQKIPELSEG SKYVRFRCRA KAVYSGRPQY SPWSATPASY VEILSPPPIV NSSMVQKVMT CLGESNGSVR VPAGALSGPN STMRWILRPG TVTDPCFPGT NSNCGNGIAQ SDGTVPLATE IYYDKLTEGN YTLWFVNPGQ EARSCFSSYP FTVSSFPVVT LTEDVSAHKN ISCYNANNGQ LTAIATGGDP AGQYLFTLLH SDNTVYIPEQ PGNGATMTWN NLPSGFYRLR VRNNKCGEIK TSADIELTQP KQVTGDIFIA EPTCNVPGNG SITLTANATG VSKFRYDLYK NGEIQQQSGS VTESTYTFSG LTGGDYIVQL FNDDIAGCPP WNGDTTLITP APLTLQMNAR DSVSCNGGSD GRLEFSATGG SGVYTFTLSG AAIGTRTNAN GIFNNLPAGN YTIQLTNQAA GCNDQISQQV DIFQRSPLSV QLQSTLISCF EAEDGTIKAT VNGGSGSYKY TWQQLKNNIW AGNSFWFETD TKIEALPAGT YRVIITDAKA PACAITSDEI VINDVTELKI TDITVTDAVC LADGVHISMS ASGGTGAYTY SWSTDGGTTY TPFTAATTFT TTATYQLQVK DGNGCKTDAD NTYNIVLPAA ALDFTMAVSD YHGFNISCKD ASDGKITVNA QGGNGGSYTG YQYSINGATY QSDAVFNNLV AGTYTIKVKD ARGCQITKTV TLLQPAIAVT LTKSDILCNG AATGTLRTDI TGGAAPYILK VNGTEVTAGT MMQQLPAGNY AIHITDANGC TKDTAISIVY TYPALTINSA VVTDMVCYGT TGHISIDAAG GDGIHAFSLS TDNWTNAASY TSGAGLTAGN YALRVTDGQG CITTYPTALL ITTPTAPLAL TATLSDYNGF NISCNGGSNA FADIKATGGN GANYTGYTYA IDNGAYTSTP LIQGINAGTH TLHVKDGRGC IVSRNYQFTQ SALAIDLTLA SKQDVPCAYV PAGSITVAGS GGAGGLQYSI DNSHWQTSTT FSNLVGGTYT IWVKDLNSCG KSITVSLVPV NAPIVIDNIT VNDIVCYGQK GTIQVQAHGG TGILTNEYAW NGGAYNNTFT NTTQLGDGAY TIRVKDAAGC YSPVSAVKQI SAPAIALNTV VTTSAYNGVQ ISCNGLSDGS ISLATNGGNG GNYTGYTYSV NNSAYTATNS YNNLPAGNYN IKIADGRGCV LNRQVVLQQP AALKLAVSSK EDLPCGANPT GKIHLQASGG TTPYAFAMNN GNWQSAALFE ALPANTYALS VKDLNGCRVN ITQEIKAMYP PIDATADITN VSCNALSDAK LVMHVTGGDG RYTYEWNAGG GSGSTLQQIP AGTYTVKVTD GAGCFRTFTH EVTQPDKLTL EVTAPPICDG LSDGTIDAAV DGGTLPYKYS LNQSNWLTTG AFTQMDAGQY NMSVQDAHGC EVVQNFEIGK VNVKPDINFL VASRKNAMDT LIIREISLPA PDHVRWNYSP AATLLGYEND GTPLIKFSAP GTYWVEMTAT FGECTYTERK DLIISPYDPL SGPGYTVPVS VIDTVMLSPN PNNGYFRFTV KLNRKQQVVA YVYDMNGIIS AKRQYAPALQ IDDNITVGGT ASGTFILRII TESESRDVRF IISR
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