Gene Cpin_2773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2773 
Symbol 
ID8358934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3403545 
End bp3405617 
Gene Length2073 bp 
Protein Length690 aa 
Translation table11 
GC content47% 
IMG OID644964953 
ProductFibronectin type III domain protein 
Protein accessionYP_003122453 
Protein GI256421800 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0000670095 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACCGTA TCCTATTGAC CCTTTTGTGT TCCGTGATGT TGTTCTGCTG CGGTATAGAC 
CGGTCCTATG CACAGGAAAA TGTGCATAAG ATCGCTGGTC TGGCTGCCCC CAAAGAAGGA
ATGATCCGTT TACGCTGGTC TCCTTCCAGC TATATTGCCT GGGAGATCGG TAATAAATAT
GGTTATACCG TTGAACGTTT TACTATTTCC GAGAACGGCG TTCTTGTCAG TCACCCTAAA
CCCGTGATGC TGACACGCCA GCCTTTAAAG CCCTATCTGC TGGAACGCAT GGAAGCACTG
GCCGAAAAAG ATGATCGGAT CGCCATCATG GCAGAACTGA TCTACGGCGA AGGAGCAAAG
AAAGTAACGC CGGAAGAAGG TATCGGCTCT TTCCTGGAAA ACCAGAATAT TAATGACTGG
CGCATGGGCA TGGCCCTGTT GAATGCAGAC CTGTCTGTGA CTGCAGCACA GAGTGCCGCC
TTGTACCTGG AAGATACGGA CGTGAAAAAA GGAGAGCGTT ACGCCTATCG TATTGCACCT
GCACGTCAGC CCCAGAATCT GACCATCGAC ACCGCCTATA TCGTGACTTC CCTGGAAGAA
ACATTCCTGC TGGCAAAACC ACAGGAACTG GCCATTGTAT GTGCAGACAG CACCGCTACA
CTGGGATGGG TGACCACTTA CTCCTGCAGC ATGTATTCTG CCTATGTGAT AGAAAGAGCA
GTAGATGGCA AGAACTTCAA ACCTGTATCT GCACTGCCGG TGATACCGAC AGCACCGGAT
AAGAATGGTT TCTCCTATTA CCAGGATTCA CTCCCTGACA ACGATAACAG GTATACCTAC
CGCATAAAAG GGATCTCGCC TTTTGGCGAA TATGGTCCTT ACTCTCAGAC CGTCGAAGGA
ATGGGGGTAC CGGCTGTAGC TGACCGTCCT GTAATGGACA CGATCATTGT TGCAGATAAT
AAAAAGATCA CGCTGCAATG GACCCTGCCA GGCAAGTTAT CCCAGCAGTT GTCGCAACTG
ATCATCACCC GTGCCGATAA TAGCCGTGGT CCTTTTACAC CGGTAGGTAC ACTGAAAGGA
AACGCCCTCA CCTTTACGGA TGACAAGCCT TTAACATCCA ATTACTATCG TATCAAGGGT
ATTACAAAGA GTGGTAAGGC CATTTATTCC TTCCCTTACT TTGCGCAACT GATAGACAGT
ACGCCTCCGG CAGTGCCTGT GGGATTAGCC GGTAAGATTG ACTCCGTGGG TATTGTTTCC
CTGCAATGGA CGGCCAATAC AGAAATAGAC TTACGCGGTT ATCGTGTATT CCGGGCGAAC
AGCAATAAAG AAGAATTTGT GGAAGTAACT CGTGAGATAT TAGCACGTCC ACTGTTTGCC
GATACCGTGA CTTTACACAC GCTGACGGCA CATGTGTTTT ATAAAGTGAT TGCAGTCGAT
AAGAACTACA ATCCCTCTGA ATATTCTCCT TACATCATGC TGAGAAGACC AGACACGATT
GCACCTTCCC GTCCGCTGAT CACCAAAGCA TACCGCTCTG ACAGTCTGCA TGCAATTGTA
CTGGAATGGA TCAACAGTTC CAGTAAGGAC GTAGTGAAAT ATGCACTGTA CAGTATCAAT
ACCAAAGACA GCACCCGCAG GGAAGCCGCT GTATGGGATA CCGCTGCTAA GCGTGAACGT
TATGTAGACA CCGCATTAAC AGCAGGAAAT ACCTATTACT ACGAACTGAT GGTGTATGAT
GACGCCGGTA ATCACGCAAA AGAAATCAGT GGCGATATCT GGTTTGAAAC CGGAAAACGG
AACGCTGTAA AGAACTTCAA AGGCATTGTC AATACAGAAA AGAAACACAT TGAACTGAGT
TGGCAGTATA ACCAGCCGGA AGTGAAACAA TACCGTATCT ATCGTGCCAA GAACGACAAC
CCCTTTATCC TGTATACCAC TACCGATGCC GGCATCCAGC AATGGACAGA TAATGAAGTG
TTTTTAGGCA ATGTTTATAA ATATAAAATT ACCGCTGTGA TGAAAGGAGA TGTGAAAGCA
GAGATGAGCA GAGTGGTAGA AATTAAATTC TAA
 
Protein sequence
MHRILLTLLC SVMLFCCGID RSYAQENVHK IAGLAAPKEG MIRLRWSPSS YIAWEIGNKY 
GYTVERFTIS ENGVLVSHPK PVMLTRQPLK PYLLERMEAL AEKDDRIAIM AELIYGEGAK
KVTPEEGIGS FLENQNINDW RMGMALLNAD LSVTAAQSAA LYLEDTDVKK GERYAYRIAP
ARQPQNLTID TAYIVTSLEE TFLLAKPQEL AIVCADSTAT LGWVTTYSCS MYSAYVIERA
VDGKNFKPVS ALPVIPTAPD KNGFSYYQDS LPDNDNRYTY RIKGISPFGE YGPYSQTVEG
MGVPAVADRP VMDTIIVADN KKITLQWTLP GKLSQQLSQL IITRADNSRG PFTPVGTLKG
NALTFTDDKP LTSNYYRIKG ITKSGKAIYS FPYFAQLIDS TPPAVPVGLA GKIDSVGIVS
LQWTANTEID LRGYRVFRAN SNKEEFVEVT REILARPLFA DTVTLHTLTA HVFYKVIAVD
KNYNPSEYSP YIMLRRPDTI APSRPLITKA YRSDSLHAIV LEWINSSSKD VVKYALYSIN
TKDSTRREAA VWDTAAKRER YVDTALTAGN TYYYELMVYD DAGNHAKEIS GDIWFETGKR
NAVKNFKGIV NTEKKHIELS WQYNQPEVKQ YRIYRAKNDN PFILYTTTDA GIQQWTDNEV
FLGNVYKYKI TAVMKGDVKA EMSRVVEIKF