Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2773 |
Symbol | |
ID | 8358934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3403545 |
End bp | 3405617 |
Gene Length | 2073 bp |
Protein Length | 690 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644964953 |
Product | Fibronectin type III domain protein |
Protein accession | YP_003122453 |
Protein GI | 256421800 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0000670095 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCACCGTA TCCTATTGAC CCTTTTGTGT TCCGTGATGT TGTTCTGCTG CGGTATAGAC CGGTCCTATG CACAGGAAAA TGTGCATAAG ATCGCTGGTC TGGCTGCCCC CAAAGAAGGA ATGATCCGTT TACGCTGGTC TCCTTCCAGC TATATTGCCT GGGAGATCGG TAATAAATAT GGTTATACCG TTGAACGTTT TACTATTTCC GAGAACGGCG TTCTTGTCAG TCACCCTAAA CCCGTGATGC TGACACGCCA GCCTTTAAAG CCCTATCTGC TGGAACGCAT GGAAGCACTG GCCGAAAAAG ATGATCGGAT CGCCATCATG GCAGAACTGA TCTACGGCGA AGGAGCAAAG AAAGTAACGC CGGAAGAAGG TATCGGCTCT TTCCTGGAAA ACCAGAATAT TAATGACTGG CGCATGGGCA TGGCCCTGTT GAATGCAGAC CTGTCTGTGA CTGCAGCACA GAGTGCCGCC TTGTACCTGG AAGATACGGA CGTGAAAAAA GGAGAGCGTT ACGCCTATCG TATTGCACCT GCACGTCAGC CCCAGAATCT GACCATCGAC ACCGCCTATA TCGTGACTTC CCTGGAAGAA ACATTCCTGC TGGCAAAACC ACAGGAACTG GCCATTGTAT GTGCAGACAG CACCGCTACA CTGGGATGGG TGACCACTTA CTCCTGCAGC ATGTATTCTG CCTATGTGAT AGAAAGAGCA GTAGATGGCA AGAACTTCAA ACCTGTATCT GCACTGCCGG TGATACCGAC AGCACCGGAT AAGAATGGTT TCTCCTATTA CCAGGATTCA CTCCCTGACA ACGATAACAG GTATACCTAC CGCATAAAAG GGATCTCGCC TTTTGGCGAA TATGGTCCTT ACTCTCAGAC CGTCGAAGGA ATGGGGGTAC CGGCTGTAGC TGACCGTCCT GTAATGGACA CGATCATTGT TGCAGATAAT AAAAAGATCA CGCTGCAATG GACCCTGCCA GGCAAGTTAT CCCAGCAGTT GTCGCAACTG ATCATCACCC GTGCCGATAA TAGCCGTGGT CCTTTTACAC CGGTAGGTAC ACTGAAAGGA AACGCCCTCA CCTTTACGGA TGACAAGCCT TTAACATCCA ATTACTATCG TATCAAGGGT ATTACAAAGA GTGGTAAGGC CATTTATTCC TTCCCTTACT TTGCGCAACT GATAGACAGT ACGCCTCCGG CAGTGCCTGT GGGATTAGCC GGTAAGATTG ACTCCGTGGG TATTGTTTCC CTGCAATGGA CGGCCAATAC AGAAATAGAC TTACGCGGTT ATCGTGTATT CCGGGCGAAC AGCAATAAAG AAGAATTTGT GGAAGTAACT CGTGAGATAT TAGCACGTCC ACTGTTTGCC GATACCGTGA CTTTACACAC GCTGACGGCA CATGTGTTTT ATAAAGTGAT TGCAGTCGAT AAGAACTACA ATCCCTCTGA ATATTCTCCT TACATCATGC TGAGAAGACC AGACACGATT GCACCTTCCC GTCCGCTGAT CACCAAAGCA TACCGCTCTG ACAGTCTGCA TGCAATTGTA CTGGAATGGA TCAACAGTTC CAGTAAGGAC GTAGTGAAAT ATGCACTGTA CAGTATCAAT ACCAAAGACA GCACCCGCAG GGAAGCCGCT GTATGGGATA CCGCTGCTAA GCGTGAACGT TATGTAGACA CCGCATTAAC AGCAGGAAAT ACCTATTACT ACGAACTGAT GGTGTATGAT GACGCCGGTA ATCACGCAAA AGAAATCAGT GGCGATATCT GGTTTGAAAC CGGAAAACGG AACGCTGTAA AGAACTTCAA AGGCATTGTC AATACAGAAA AGAAACACAT TGAACTGAGT TGGCAGTATA ACCAGCCGGA AGTGAAACAA TACCGTATCT ATCGTGCCAA GAACGACAAC CCCTTTATCC TGTATACCAC TACCGATGCC GGCATCCAGC AATGGACAGA TAATGAAGTG TTTTTAGGCA ATGTTTATAA ATATAAAATT ACCGCTGTGA TGAAAGGAGA TGTGAAAGCA GAGATGAGCA GAGTGGTAGA AATTAAATTC TAA
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Protein sequence | MHRILLTLLC SVMLFCCGID RSYAQENVHK IAGLAAPKEG MIRLRWSPSS YIAWEIGNKY GYTVERFTIS ENGVLVSHPK PVMLTRQPLK PYLLERMEAL AEKDDRIAIM AELIYGEGAK KVTPEEGIGS FLENQNINDW RMGMALLNAD LSVTAAQSAA LYLEDTDVKK GERYAYRIAP ARQPQNLTID TAYIVTSLEE TFLLAKPQEL AIVCADSTAT LGWVTTYSCS MYSAYVIERA VDGKNFKPVS ALPVIPTAPD KNGFSYYQDS LPDNDNRYTY RIKGISPFGE YGPYSQTVEG MGVPAVADRP VMDTIIVADN KKITLQWTLP GKLSQQLSQL IITRADNSRG PFTPVGTLKG NALTFTDDKP LTSNYYRIKG ITKSGKAIYS FPYFAQLIDS TPPAVPVGLA GKIDSVGIVS LQWTANTEID LRGYRVFRAN SNKEEFVEVT REILARPLFA DTVTLHTLTA HVFYKVIAVD KNYNPSEYSP YIMLRRPDTI APSRPLITKA YRSDSLHAIV LEWINSSSKD VVKYALYSIN TKDSTRREAA VWDTAAKRER YVDTALTAGN TYYYELMVYD DAGNHAKEIS GDIWFETGKR NAVKNFKGIV NTEKKHIELS WQYNQPEVKQ YRIYRAKNDN PFILYTTTDA GIQQWTDNEV FLGNVYKYKI TAVMKGDVKA EMSRVVEIKF
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