| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2768 |
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| Symbol | |
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| ID | 8358929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3393365 |
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| End bp | 3396568 |
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| Gene Length | 3204 bp |
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| Protein Length | 1067 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644964948 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003122448 |
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| Protein GI | 256421795 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000113347 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGGATCC TGGCCATCTT AGGTTTGATC ACCTGTTCAA TATGTGTATT CCTCACAGGA
ACGGCACAAC AGTCAGCACT GCTCCAGCAA CGCCTGGATG TACGGGTGAA GAACATGCCG
GTCATTACCT TCATGAAGTG GATCAGCCAG CAAACAGGTA ACTCCTTTGC TTATCCCAAC
GAAATATTAG AAGGTCGTAC ATCCGTTACT ATCAATGAAC GCGATATCAC CGTACAGACA
ATCCTCGAAC GTATCTTTCC TCCCGCAAAA TATGATATCA GGACCATCGG TCACCAGATT
ATCATCCGCT TTAAAAAACA AACTTCCCTG ACAGCCGATA CCTTGCAACC TGCCCGTATC
ATGCAGATGA ATACCGTGGT AGTAACAGCC TTGGGTATCA ACCGGCCCAA GTACACACTG
GGTTATGCCT ATGCTGAAAT AAAAGGAGAA GAAATGACGG CTGCCCGGGA TATACACCCC
ATGAATACCC TGAGTGGAAA GGTAGCCGGA CTGGAAGTGA GTGCGGTAAA CAGCGGTATG
GGAGGATCGA CCAAACTGAC CCTCAGAGGT ATGCGTTTAT TAGGCGGTAA TAACCAACCC
TTGCTGGTCA TGGATGGTAT CCCCGTCAAT AATTCCTCTC CCGGACAGGC AGAAAGGTAT
GGCGGTTATG ACCTGGGTGA CGGAACGGCC ATTATTAACC CTGATGATGT CGAGACGATC
TCCGTGCTTA AAGGAGGGGC TTCCGCTGCT TTATACGGAA CAAGGGCTTT AAACGGAGTA
ATTCTTGTTA CAACCCGGAA AGGTGTTCGT AAAGGGCTGG AAATGGCCTT TACGTCGAAT
ATACAGCTGG AGCAGACCAA CAATCAATAC GATTTCCAGG ATAGCTATGG CAGCGGACGC
GATGGCGTAC TCCCTGTCAG CGCTGCAGAA GCCAGATGGG TATCCCAGTA CAGCTGGGGA
CCAAAACTGC ACCCGGATAG CCTGGTGTGG TTATGGAACG GACAACAGGC GCCTTACGTA
AAGGCGCGTC ATTCCATTGC TGACTTCTTC CGTGAAGGCT TTACACGCAT CAATACCCTG
GCCGCTGCAA CAGGGAATGA ACATACACAG CTGCGTTTCT CCTACACTAA TACAGGTACG
CACGATATCC TGCCACAAAG CGGTTTGCAA AGGCATAATC TTTCTGCCAG GGTGACAACC
GTTCTGGGAC GTCGCTTCGA ACTGGATACG CGGCTGGCCT GGCTGAACGA ACAGGTGCAG
AACCGCCCGG CACTCTCCGA TAATCCTAAC AATGTCGGTT ATGTATTAAC GGGTGTAGCG
CCCAATATTG ATCTGAACTG GCTGAAGCAT TATAAAGATC GCGTCACCGG TAATTATATC
AACTGGAATA ACAACACCTA CCAGGTCAAT CCTTACTGGG CTGTCTATGA ACAGCCCAAT
GCCAGTGTAC AGAACCGGCT CAATGGTTTC CTGCAATTGA AGTATAAGAT ATCCCCGGAT
CTGGCGGTAC ACGTTCGTTC TGGTATGGAC TACTCCGATT TTTCTTTCTA TGAGCTGATG
AATTACTCCA CACCGGTCAA TCCCTTAGGC GCTATCTCGC TTAAAGACAG AAGACTATGG
GAGAGTAATA CAGATCTCCT GCTTACTTAC AGCCGCCAGT TAAACCGCTG GGGAATTACA
CTGAACACCG GCGCCACGCG TATGGACTAC CAGGAACGGG TGCGTAATAC CACCGGCAGG
GAAATGAACA TCAGGGGAAA CAGGGGTATT GAAAATTTCA GTACACGTAT GCGCAATGAA
ATGATCCTCA GAAAACGGAT TAATTCCATA TATGCTTCCC TGGATAAAGA TTACGGACGA
CTGCTGCATC TCTCGCTGAC AGGCCGTAAT GACTGGTCGT CTACATTACC TGCTGATCAC
AATGCTTATT TTTACCCTTC TGCTTCCGCC GCATTTCAGT TCAGTGAACT GCTGAAAGAC
AAACGTATCC TGTCTTCCGG TAAACTGCGT GTCTCTGTTG CGCAAACAGG TACAGATGCC
GCACAGCCTT ACCTGCTGCG TTTAAGCTAT GCCTATAATC CGGATATCCC CAGTATAAAA
GGCTATTCGA TTGGTGGAGT AGCCGTGGAT AATGTGCCTT TTGCCGACCT GCGTCCCGGT
ATCAGCAAAG GATATGAAGC GGGCCTGGAT CTCGCCTTTT TTAATGATCG TGTCAGTCTG
GATGCCACCT GGTACCATAC CAATACCCTC GATCAGGTAT TGAATGCTCC TGTGTCTTCA
TCCAGTGGCT ATACGAGTGC GGTGATCAAT TCCGGCAATA TCCGTAACCA GGGAATAGAA
CTGGGACTCA CCCTCGTGCC CTTAACCCGT CAGCAGTTAC ATTGGGATAC CCGTTTTATT
TTTTCCCGCA ATTGTAATCG TATACGCTCC CTGAATACGC TGGTTTCACC CTATTATACC
ATGGCTGTCG GACGCTGGGG TAATGCCTCT ATCGTCGCAA AAAAAGGGGA GGCTTACGGG
ATGATCAGCG GGAAACAATT TCTGCGGGAT GTACAGGGCA GGATGGTACT CGACGCGAAT
AACCTGCCGA AGTATACTAC CACAGATGGC TACCTGGGAA ATAACCAGTA TGACTGGACG
GGCAGTATTA CCAATAAAGT GACTTACAAG CGGCTTAGTC TGACGATACT ATTGGACATC
CGGTATGGTG GCAATATCTA CTCTATAACC AATCTCCTTG CCTACGGCAA CGGTAAACAA
AAAGGCACGC TGGCAGGCAG AGATGCATGG ACCCGCTCCG AAGAGGAACG TGTCAGCGCA
GGTAAAAGAC CGGAAGAATG GACGCCTACG GGGGGATTGC TGGTCAGCGG TGTACAGGCA
GGCACAGGGA ATGAAGTACA GGCGTACGTT AATCCGCAGA CCTACTGGAC ACGGGTGTCT
GACAATATTC CTGAAGCTTT TGTCTATGAC GCCTCTTTTA TAAAATTACG GGAGCTGCAT
CTCGATTATC AGCTGCCTCG TTTTTCCACC CGGTTCAAAG AAGCAACTGT ATCACTGACA
GGTCGTAACC TGGCGACCCT GTATAAGGCG GTACCTAATA TTGATCCTGA ATCAAGTTAT
AACAATACCA CGGCGCAGGG CCTGGAATAT GGTTCCCTGC CGATGAGAAG ATCTTACGGT
ATCAAACTGT ATGTCAAATT TTAA
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| Protein sequence | MRILAILGLI TCSICVFLTG TAQQSALLQQ RLDVRVKNMP VITFMKWISQ QTGNSFAYPN
EILEGRTSVT INERDITVQT ILERIFPPAK YDIRTIGHQI IIRFKKQTSL TADTLQPARI
MQMNTVVVTA LGINRPKYTL GYAYAEIKGE EMTAARDIHP MNTLSGKVAG LEVSAVNSGM
GGSTKLTLRG MRLLGGNNQP LLVMDGIPVN NSSPGQAERY GGYDLGDGTA IINPDDVETI
SVLKGGASAA LYGTRALNGV ILVTTRKGVR KGLEMAFTSN IQLEQTNNQY DFQDSYGSGR
DGVLPVSAAE ARWVSQYSWG PKLHPDSLVW LWNGQQAPYV KARHSIADFF REGFTRINTL
AAATGNEHTQ LRFSYTNTGT HDILPQSGLQ RHNLSARVTT VLGRRFELDT RLAWLNEQVQ
NRPALSDNPN NVGYVLTGVA PNIDLNWLKH YKDRVTGNYI NWNNNTYQVN PYWAVYEQPN
ASVQNRLNGF LQLKYKISPD LAVHVRSGMD YSDFSFYELM NYSTPVNPLG AISLKDRRLW
ESNTDLLLTY SRQLNRWGIT LNTGATRMDY QERVRNTTGR EMNIRGNRGI ENFSTRMRNE
MILRKRINSI YASLDKDYGR LLHLSLTGRN DWSSTLPADH NAYFYPSASA AFQFSELLKD
KRILSSGKLR VSVAQTGTDA AQPYLLRLSY AYNPDIPSIK GYSIGGVAVD NVPFADLRPG
ISKGYEAGLD LAFFNDRVSL DATWYHTNTL DQVLNAPVSS SSGYTSAVIN SGNIRNQGIE
LGLTLVPLTR QQLHWDTRFI FSRNCNRIRS LNTLVSPYYT MAVGRWGNAS IVAKKGEAYG
MISGKQFLRD VQGRMVLDAN NLPKYTTTDG YLGNNQYDWT GSITNKVTYK RLSLTILLDI
RYGGNIYSIT NLLAYGNGKQ KGTLAGRDAW TRSEEERVSA GKRPEEWTPT GGLLVSGVQA
GTGNEVQAYV NPQTYWTRVS DNIPEAFVYD ASFIKLRELH LDYQLPRFST RFKEATVSLT
GRNLATLYKA VPNIDPESSY NNTTAQGLEY GSLPMRRSYG IKLYVKF
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