Gene Cpin_2765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2765 
Symbol 
ID8358926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3390958 
End bp3391740 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content49% 
IMG OID644964945 
ProductEthanolamine ammonia-lyase 
Protein accessionYP_003122445 
Protein GI256421792 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4302] Ethanolamine ammonia-lyase, small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00110099 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTAATA TACGACACAG CAACGCAGTA AAGGAAGATC CCTGGTCTTC ACTCAAGGCA 
TTCACCACTG CACGGATTGC ATTGGGAAGA ACAGGAACGG CTATTCCGCT GAAAGAAGTC
TTGTCTTTCA GACTGGCACA TGCACATGCC AGGGATGCGG TTTATTCAAA ACTGGATACC
AATCTGCTGC TGGAAGAATT ACACGCATTT TTGCTGCCGG TATTACCCTT ACATAGCAGT
GCCGCTGATC GTTATGAATA CCTGCAACGT CCGGACAAAG GACGCCGTCT GGATACACAG
AGTATTGATA TGCTCAGGGC GCAGCCGGAT GCCTTCCGGC AGAAAGATGT CGCTATTATT
ATTGCCGACG GACTTTCCGC TACTGCTATG AATATACATA CTGCTCCTTT GTTGAATCAT
TTACTGCCCA TGCTGAAAAC AGCCGGATTG TCCATCGCGC CGGTTTGTCT GGCAGAGCAG
GCCAGGGTGG CAATAGGAGA TGAAATAGGG GATCTGCTGG AGGCAAAGAT GACACTTGTA
CTCATAGGAG AACGTCCCGG ACTGAGTGCT GCCGATAGTA TGGGAGCCTA TATCACCTTT
AATCCCCGTC CCGGGAATAC GGACGAAGGC CGGAACTGTA TTTCCAACAT CCGTCAGGAT
GGGTTGCAGT ATATCCCTGC GGCAGGGAAG ATCTGTTACC TGTTACAGGA GGCGATGAAA
CTGCGTCTTT CCGGTGTGGA ATTGAAGGAT AATTATGTGG ATCTTTCACT GCTTAGCGAA
TAA
 
Protein sequence
MSNIRHSNAV KEDPWSSLKA FTTARIALGR TGTAIPLKEV LSFRLAHAHA RDAVYSKLDT 
NLLLEELHAF LLPVLPLHSS AADRYEYLQR PDKGRRLDTQ SIDMLRAQPD AFRQKDVAII
IADGLSATAM NIHTAPLLNH LLPMLKTAGL SIAPVCLAEQ ARVAIGDEIG DLLEAKMTLV
LIGERPGLSA ADSMGAYITF NPRPGNTDEG RNCISNIRQD GLQYIPAAGK ICYLLQEAMK
LRLSGVELKD NYVDLSLLSE