Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2754 |
Symbol | |
ID | 8358915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3380702 |
End bp | 3381103 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644964934 |
Product | transcriptional repressor, CopY family |
Protein accession | YP_003122434 |
Protein GI | 256421781 |
COG category | [K] Transcription |
COG ID | [COG3682] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.26689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTAT TTAAGAAAGA TCCAACTCCT GATATGGTGC CTACCAAAAC AGAAATGGAC GTACTACAGG TACTCTGGCA GTATGGCCCT TCTACTGTGC GTTTTGTGCA TGATAAGCTG AACGAGCAGA AAGAAGCCGT TATCTATACC AGTACGCTGA AACTGATGCA GGTAATGAAG GAGAAGGGAA TGCTGGACCG TGATGAAAGC AGCATGAAAC ATGTTTACAG CGCTGTTGTG GAGGAAAATA AGGTAAAGGG TACTATGCTC GGCCGCTTTA TGGATACTAT GTATAACGGC TCTCCCAGCG ATCTGATGGT CGCCCTGTTA GGTAACGACA GGACTTCCAC TGAAGAACTG CAAAAGATAA AAGAGCTGCT GAAAAAAATG GACGATAAAT AG
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Protein sequence | MSLFKKDPTP DMVPTKTEMD VLQVLWQYGP STVRFVHDKL NEQKEAVIYT STLKLMQVMK EKGMLDRDES SMKHVYSAVV EENKVKGTML GRFMDTMYNG SPSDLMVALL GNDRTSTEEL QKIKELLKKM DDK
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