Gene Cpin_2754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2754 
Symbol 
ID8358915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3380702 
End bp3381103 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content44% 
IMG OID644964934 
Producttranscriptional repressor, CopY family 
Protein accessionYP_003122434 
Protein GI256421781 
COG category[K] Transcription 
COG ID[COG3682] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.26689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTAT TTAAGAAAGA TCCAACTCCT GATATGGTGC CTACCAAAAC AGAAATGGAC 
GTACTACAGG TACTCTGGCA GTATGGCCCT TCTACTGTGC GTTTTGTGCA TGATAAGCTG
AACGAGCAGA AAGAAGCCGT TATCTATACC AGTACGCTGA AACTGATGCA GGTAATGAAG
GAGAAGGGAA TGCTGGACCG TGATGAAAGC AGCATGAAAC ATGTTTACAG CGCTGTTGTG
GAGGAAAATA AGGTAAAGGG TACTATGCTC GGCCGCTTTA TGGATACTAT GTATAACGGC
TCTCCCAGCG ATCTGATGGT CGCCCTGTTA GGTAACGACA GGACTTCCAC TGAAGAACTG
CAAAAGATAA AAGAGCTGCT GAAAAAAATG GACGATAAAT AG
 
Protein sequence
MSLFKKDPTP DMVPTKTEMD VLQVLWQYGP STVRFVHDKL NEQKEAVIYT STLKLMQVMK 
EKGMLDRDES SMKHVYSAVV EENKVKGTML GRFMDTMYNG SPSDLMVALL GNDRTSTEEL
QKIKELLKKM DDK