Gene Cpin_2752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2752 
Symbol 
ID8358913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3377886 
End bp3378731 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content46% 
IMG OID644964932 
Producthypothetical protein 
Protein accessionYP_003122432 
Protein GI256421779 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.71434 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGA TCAACACCAT GCGTAACACT TTACTGGCTG GTTTACTCAT TTGCAGCGTC 
AGTGCTTACG CACAAAAGAA ACCAAAGCCA ACTATATATG GCACGCACAC CAACAGGAAT
ACAAATACCA ATGAAGAAAC CATCAGCACT GACAAGGATG GTCAAACCTA TGAAATGACC
TTCATAGACG GTAAAATGAC CTCTTTCTCT GTTGATGGCA AAACAATTCC TGCGGAGCAA
TGGGGCAGCT ACCAAAAGCA GATCGATGAA ATTAAGGAGC AGGTAAAGAA AGACCGCGAG
CAGGCTGAGA AAGATCGTGC ACAGGCAGCA AAAGACAGGG AACATGCGAA ACTGGACCGC
ATACAGGCCG ATAAAGACAG ACTACAAGCC TTACAGGACA GAAAACAGGC AGAACTCGAT
CGCCAGCAAT CATTAAAAGA TAAAGCCCAG GCAGATCGCG ACAGAGCCCA GGCGGATCAG
GATAGAAAGC AGGCAGAAAA AGACAGGCAA CAGGCCGTCC TCGATCGTGC GCAGGCAGAT
AAGGATAGAG AACAGGCAGA TAAAGACAGA GCACAGGCAG ATAAAGACCG TGCTGCTGCT
GAAGAGGAGA GAAAGCTGAT CAATGACCTT GTCAGCGATC TCGTAGCCGA TAAACTGATC
ACTGCTAAAA GCGATCTACA TGAACTGGTG ATCAGCGATC AGGGAATGAC ACTTAATGAG
CAGCAACAAC CAGACGCTAT TTATCAGAAA TATATCAGTA AATACCAGGA CCTTATTAAG
ACCGGTATTT CATACAAAGC TGAGGGTGGG AATATTTCAA TCCGGCGGAA CTGGAGGAAA
AAATAA
 
Protein sequence
MNAINTMRNT LLAGLLICSV SAYAQKKPKP TIYGTHTNRN TNTNEETIST DKDGQTYEMT 
FIDGKMTSFS VDGKTIPAEQ WGSYQKQIDE IKEQVKKDRE QAEKDRAQAA KDREHAKLDR
IQADKDRLQA LQDRKQAELD RQQSLKDKAQ ADRDRAQADQ DRKQAEKDRQ QAVLDRAQAD
KDREQADKDR AQADKDRAAA EEERKLINDL VSDLVADKLI TAKSDLHELV ISDQGMTLNE
QQQPDAIYQK YISKYQDLIK TGISYKAEGG NISIRRNWRK K