Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2726 |
Symbol | |
ID | 8358887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3335120 |
End bp | 3335791 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644964906 |
Product | uracil-DNA glycosylase |
Protein accession | YP_003122406 |
Protein GI | 256421753 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0692] Uracil DNA glycosylase |
TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGTTA AAATTGAACC CAGCTGGAAG GAGGTCCTCA AAGACGAATT TCACAAAGCC TATTTCGAAC AAATTGTCAT GGCACTCAAG CATGAAAAAG CGGTAGGAAA TACTGTTTAT CCTCCTGGAA ACCTGATTTT CAATGCATTC GAGCATACCC CCTTTGACAA GGTGAAGGTC GTACTGCTGG GCCAGGACCC CTATCATGGT CCCAATCAGG CCCACGGATT ATGTTTTTCT GTACAGGATG GTATCAAGCC CCCGCCATCT CTGGTGAACA TCTATAAGGA GATGAAAGAA GATCTGGGCC TGCCGATCCC GCAGGGTGGT AACCTGACAA AGTGGGCTGA TAATGGGGTG CTGCTACTCA ACGCAATGCT CACTGTACGG GCAAACGAGG CTGCTTCTCA CAGCAAAATA GGTTGGGAGA GCTTCACGGA CTCCGTGATC CGGAAAGTGT CTGATTTGAA GGAAAATGTG GTATTTATTC TTTGGGGACG TTTCGCACAG GATAAACAGG TCCTGATCGA CGCTACCAAA CACCATATCC TGAAAGCAGC CCATCCCTCG CCTTTTAGTG CCGATAAAGG CTTTTTTGGA TGTAAACACT TCTCCAAGAC GAATGAACTG CTGTCTAAGG CCGGTATTGA ACCGGTGGAC TGGCGTTTAT AG
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Protein sequence | MEVKIEPSWK EVLKDEFHKA YFEQIVMALK HEKAVGNTVY PPGNLIFNAF EHTPFDKVKV VLLGQDPYHG PNQAHGLCFS VQDGIKPPPS LVNIYKEMKE DLGLPIPQGG NLTKWADNGV LLLNAMLTVR ANEAASHSKI GWESFTDSVI RKVSDLKENV VFILWGRFAQ DKQVLIDATK HHILKAAHPS PFSADKGFFG CKHFSKTNEL LSKAGIEPVD WRL
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