| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2721 |
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| Symbol | |
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| ID | 8358881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3323303 |
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| End bp | 3324982 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644964901 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003122402 |
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| Protein GI | 256421749 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATATA AATATAATTC ATACGGTCAT GTCCTCGTGC TGGCACTGCT GATCTTCATT
ACGAGCGCCT GCAAAAAAGA TGGCTTTCTG AATGTAGATC CAAAAGGATC CCTCACTGAT
GAAAGCACCT TCGCCACTGA AGCAAATGCT GATCTTTTCG TAAATGATAT TTACGACCAG
CTGCCTGATA TGAATAATGA ATCTCAGCTG CTGGACCAAT GGACGGATAA CAGTTGTGTA
GGCGCCACGT GGATGACAGG ACAATCCCTC ATCCGTTCTA ATGCGTTGAA TCCATCAAAT
GCGCCGGATG GACCTGGCGC TATGTTTAAA TGGTCCGAGA ACTACAGCCG AATCCGCAGA
TGTAATGTGT TCCTGCAGCA AGCTGCAAAA TACCGGGATC ATTTCTCCGA TGAATGGTAT
CAACAACGCG TAGCGGAAGT AAAATTCCTG CGTGCACTGT TTTATTCCTT CTTGTATCAA
AACTATGGAG GTGTTCCGCT GATATCCGAG CCACTGAATA ATCAGACGAT GGGCGACAAA
ATATTCATTC CTCGCGCCAG CATGGAGGAG ACGCTGGCAT TTATCGAAGC TGATTGCGAT
GCCGCGGCTG CTGATCTGCC TACAAAAGCT GCTGCTACAG GCCGCGCTAC TAAAGGTGCT
GCCCTTACCC TTAAAGGAGC AGTAGATCTG TTTGCTGCCA GCATCCTTGT AAATACTAAT
AACGATCCGG CCCGATGGGC AAAAGCTGCC GCTGCTAATA AAGCGGTTAT AGATCTTAAT
GTTTATGACC TCTTCCCTGA CTACAATGGG CAATTTCTGG CAGCAAACAA CTGGAACATT
GAAACGATCT TCGCAAGAGG GTATGCAGTC CCAAGCAAAG GACACCGCCG GGAAGGTATG
CAGGGACCAG TGATTGTACA TGGCGTACAA CAGGCATGGG GAAATCTTGA ACCTACCCAA
AATCTGGTGG ACGACTATGA AATGGCGAAT GGCCTGCCTA TTACAGACCC TGCTTCCGGT
TACGATCCGC AACAACCATA TGTAAACCGC GAGCCACGAT TTTATGCGAC GATTGTATAT
GACGGCTCTA CCTGGCAGGG TTACACATTC CTATCACGTG TAGGCGGCAA TAACCAGATC
GATCTGGGTT CCTCCAGCGA CATCAGTAAT ACTGGTTACA ATGGCAAAAA AACCCTTGAC
GAATCTATTC TTGGCCAGAC CAGTCTCGGA ATTTACCCCG GTACTTCCAA CTATATCTTT
TACCGCTATG CGGAAGTACT GCTTAACTAT GCTGAAGCGC AAAACGAAGC TACCGGACCG
GATGCCAGTG TATATAGTGC CATTAATAGT GTGAGAAGAC GCGCTGGTTT ACCTGCGTTA
CCGGCAGGAA TGACCCAAAC CGAAATGCGT ATAAATATCC GCCGCGAACG CAGAATAGAA
CTTGCGTTTG AAGACAAACG CTGGTACGAC ATCCGCCGCT GGGATATCAC TACAAAGGGG
GAAGCCGTAC TTACTCATCC GCAATATGGT ATGAAAATTA CGACGGAGGC TAATGGTAGA
CTAACCTATA CCAAGGTACC CATATTTAAC AGTACATTCT CACAACATAT GAACTGGCTG
CCCATTCCAC AAAGTGCAAT GGAACAAAAC ACACGACTTA CACCTAATGC GGGATATTAA
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| Protein sequence | MQYKYNSYGH VLVLALLIFI TSACKKDGFL NVDPKGSLTD ESTFATEANA DLFVNDIYDQ
LPDMNNESQL LDQWTDNSCV GATWMTGQSL IRSNALNPSN APDGPGAMFK WSENYSRIRR
CNVFLQQAAK YRDHFSDEWY QQRVAEVKFL RALFYSFLYQ NYGGVPLISE PLNNQTMGDK
IFIPRASMEE TLAFIEADCD AAAADLPTKA AATGRATKGA ALTLKGAVDL FAASILVNTN
NDPARWAKAA AANKAVIDLN VYDLFPDYNG QFLAANNWNI ETIFARGYAV PSKGHRREGM
QGPVIVHGVQ QAWGNLEPTQ NLVDDYEMAN GLPITDPASG YDPQQPYVNR EPRFYATIVY
DGSTWQGYTF LSRVGGNNQI DLGSSSDISN TGYNGKKTLD ESILGQTSLG IYPGTSNYIF
YRYAEVLLNY AEAQNEATGP DASVYSAINS VRRRAGLPAL PAGMTQTEMR INIRRERRIE
LAFEDKRWYD IRRWDITTKG EAVLTHPQYG MKITTEANGR LTYTKVPIFN STFSQHMNWL
PIPQSAMEQN TRLTPNAGY
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