Gene Cpin_2717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2717 
Symbol 
ID8358877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3318041 
End bp3319237 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content46% 
IMG OID644964898 
Productputative RNA methylase 
Protein accessionYP_003122399 
Protein GI256421746 
COG category[L] Replication, recombination and repair 
COG ID[COG0116] Predicted N6-adenine-specific DNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTT ATACTACCCC TGGGGCTGTT ACCATTACCT GTCATAAGCG AAACGCACTT 
TATCTGGAAC AGGAAATAAA GGAGCTTGGC TTTGAGCAGA CAGAAACTTT TGTTACCGGT
GTAAGGTTAA AAGCAACAGT AAATGAATGT ATCAGGCTCA ACCTGAATCT CCGTTGCGCC
AGTCAGGTGT TATATAGTCT TCAATCTTTT GAGGCAGGTA ATGCGGATGA TGTGTACAAT
AATATTCACC AGTATCCCTG GGAAGATATT TTACCCGATG GCGGTTACTT TTCCATCACC
AGCAATGTCA GCAACGAAAG TATCAATAAC AGCATGTATG CTAACCTGCG CGTGAAGGAT
GCCATTATTG ACAGGATACG TGAAAAAACG GGGAAACGTC CCTCTACCGG CGCAGCTTTA
ACGGGCGCCG TCATTCATTT GTTCTGGAAA GATGAACATG CCGAAATATT TGTCGATACC
TCGGGTGATT CACTGGCCCG TCATGGGTAC CGTGCAATAT CCGGTCCTGC GCAAATGCTG
GAATCACTGG CTGCCGCCAC CATTTATGCT TCCCGTTGGG ACAGAGTGAG TCCATTCGTG
AATGTTATGT GCGGTTCCGG TACTGTTGCT ATTGAGGCCG CAATGATCGC CACTAACCGC
AGACCTGGTC TGTTCATAAC CAACTATGCC TTCATGCACC TGAAGGGTTA TGATATACAG
GTATACCAGC AGGAGGATGC CCGGCTCGAA GAGCAGATCA AAGAAATACC GGGGCTTCGC
ATTATCGCCA CTGATCACAG TGCAAAAGCC ATCGAGAGTG CCCGTAAGAA TGCGATAGCA
GCCGGTGTAG GCAAACTGAT AGAATTTGCT GTTTGTGATT TTACTGCCAC AAAGGTGCCT
CCCGGTGTGC CCGGTGTTTT TTATGTCAAT CCTGAATACG ACGAGCGAGC AAATGAAATA
ATGGTGCTCG AAGAAACATA TAGTCGTATC GGTGATTTTA TGAAACAAAA ATGTGGTGGT
TACTTTGGCT ATGTATTTAC CGGTAATCTG GAATTGGCTA AAAAGATCGG CCTGAAAGCT
AAACGACGTA TAGAGTTCTA TAGCAGTACT ATTGACTGCC GCCTGCTGGA ATATGAATTG
TACAGCGGTA CCCGTACGGA GCCAAAAGTA ACGGAGACTC CGCCTACTAC AGCGTAA
 
Protein sequence
MNIYTTPGAV TITCHKRNAL YLEQEIKELG FEQTETFVTG VRLKATVNEC IRLNLNLRCA 
SQVLYSLQSF EAGNADDVYN NIHQYPWEDI LPDGGYFSIT SNVSNESINN SMYANLRVKD
AIIDRIREKT GKRPSTGAAL TGAVIHLFWK DEHAEIFVDT SGDSLARHGY RAISGPAQML
ESLAAATIYA SRWDRVSPFV NVMCGSGTVA IEAAMIATNR RPGLFITNYA FMHLKGYDIQ
VYQQEDARLE EQIKEIPGLR IIATDHSAKA IESARKNAIA AGVGKLIEFA VCDFTATKVP
PGVPGVFYVN PEYDERANEI MVLEETYSRI GDFMKQKCGG YFGYVFTGNL ELAKKIGLKA
KRRIEFYSST IDCRLLEYEL YSGTRTEPKV TETPPTTA