Gene Cpin_2716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2716 
Symbol 
ID8358876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3317375 
End bp3317944 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content46% 
IMG OID644964897 
Productputative transcriptional regulator, Crp/Fnr family 
Protein accessionYP_003122398 
Protein GI256421745 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAC TGACTAAGAT CCTGCTGGAA TATTCTTCTT TTAACCATCA GGAGATCGAA 
CTTATAAGTG ACCGTATCAG GCACCGAGAA CTTTCCCGGG GCGATTACCT GCTGAAATCA
GGAAGGATTG CCAGGGAGCT GGCATTCGTC ACATCCGGCA TTATCCGTGT GGCGCTGCAA
TCGGAAACAG GAGATGATAT CACCAGGGCC TTCATCCCGG AATATCATTT CGCATTAAAT
TTTAATAGTC TTAATAATCA GGTGGCATCC GGCGTCAGCT TTATTGCTGT AACAGATTGC
CGGCTCCTTG TCATCGTTGA GCAGGACTTA ACGGAGTTGG GCAATACGAT CCCTCACTGG
CAGCGATTCC TGTCAAATAT CGCTGTCAAA GTGCTGTCCA ATAAAATGAA TCTGCTGAAT
GACATGATGT TACAGGATGC AGAGACGCGG TACTTAGAGT TCTTAAAAAT ATATCCGGGA
TTGGCCAACC GTATTCCATT GTCGACCCTG GCATCTTACC TCGGTATCAA TCAGTCTACG
TTAAGCCGGA TACGGAGAAA TATCTCATAG
 
Protein sequence
MNELTKILLE YSSFNHQEIE LISDRIRHRE LSRGDYLLKS GRIARELAFV TSGIIRVALQ 
SETGDDITRA FIPEYHFALN FNSLNNQVAS GVSFIAVTDC RLLVIVEQDL TELGNTIPHW
QRFLSNIAVK VLSNKMNLLN DMMLQDAETR YLEFLKIYPG LANRIPLSTL ASYLGINQST
LSRIRRNIS