Gene Cpin_2713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2713 
Symbol 
ID8358873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3314418 
End bp3315149 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content47% 
IMG OID644964894 
Producthypothetical protein 
Protein accessionYP_003122395 
Protein GI256421742 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TAATCTTCTT TTTGAGCCTC ACCATCTCTG CTATCTGTCA TGGACAACAA 
CGCGATACCT ATTTGTTCGT TCCCGGTGCC TGGGACGGGG GCTGGGACTA CGCAAAAGTT
GACTCTATAT TAAGCGCACA CGGAAATATC GTATACCGGC CTACACTTAC CGGACTGGGA
GAAAGAGTTC ATCTGGCAAA TCCCGGCATT AACCTGACAA CCTATATCAA CGACATCCGG
AACCTGATGC AGTTTGAAGA CCTGCATAAT GTGATCCTTG TTGGCCACAG TTATGGGGGA
ATGGTGATTT CCGGGGTAGC AGAACAGGTG CCGGGTCGCA TCAAACAACT CATTTATCTG
GATGCAATGG TGCCTAATGA CGGAGAAAGC GCCAAAGATG TGTGTGGTGA TCTATGGGCG
CCTATGACCC AGGGGAATAT AAAAGATAGT ATGGTACTTT ATCCTTTTGG AACGACGCCG
AAAGATGTTC CGCAACCGCT TAACACCTTT ATCGAGCCGG TAAAACTGAG CAATCCCCTG
GCCCGGAAAA TCCCGGCAGT ATTTATCCAG ATGACCAAGG ACGGGAAAGG AAGTCCTGCT
CACGACAAAA TGGGTATTGC AAGAGCAAAG GAAAGAAAAT GGAAAATCTA TAGTCTTGAA
GGCGGACACT ACGCTATGCG TGAACAACCT GAAAACCTTG TTAAAAAGCT GGAAGAAATC
ACGCAACATT AA
 
Protein sequence
MKKLIFFLSL TISAICHGQQ RDTYLFVPGA WDGGWDYAKV DSILSAHGNI VYRPTLTGLG 
ERVHLANPGI NLTTYINDIR NLMQFEDLHN VILVGHSYGG MVISGVAEQV PGRIKQLIYL
DAMVPNDGES AKDVCGDLWA PMTQGNIKDS MVLYPFGTTP KDVPQPLNTF IEPVKLSNPL
ARKIPAVFIQ MTKDGKGSPA HDKMGIARAK ERKWKIYSLE GGHYAMREQP ENLVKKLEEI
TQH