Gene Cpin_2706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2706 
Symbol 
ID8358866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3309614 
End bp3310009 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content43% 
IMG OID644964888 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003122389 
Protein GI256421736 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATAA TGGTTGATAA CAGAGAGACG ATTCCTTCCA AACAGGAATG TGACAGTTCA 
CTTAACTACG TGGTGGATGC ATTATATGTG CTTGGGGGTA AGTGGAAATT ACCACTGATT
TTAAGCCTTG TACAATCCCC TAAGCGGTTT AATGAAATTC AGCATGAACT GAGCGGGATA
TCTCCGAAGA TACTGGCGAA AGAGTTGAAA GATCTGGAGC TGAATGAATT TATTACGCGT
AAGGTATACG CCGGTACACC GGCAACGATT ATTTATGAGG CAACACCTCA TAGTCTGACG
TTGAAAGATG TATTACGCGA ATTAAGCGCA TGGGGGAAGG AGCACCGGCA GAAGATAAAA
ATGAGTATGA GACGGGAAGC TGAAAAACGT GCCTAA
 
Protein sequence
MAIMVDNRET IPSKQECDSS LNYVVDALYV LGGKWKLPLI LSLVQSPKRF NEIQHELSGI 
SPKILAKELK DLELNEFITR KVYAGTPATI IYEATPHSLT LKDVLRELSA WGKEHRQKIK
MSMRREAEKR A