| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2684 |
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| Symbol | |
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| ID | 8358844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3278176 |
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| End bp | 3279696 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644964866 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003122367 |
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| Protein GI | 256421714 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.546822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCCA TTCCTGAATG TGTAAAATTA GTAAGCCAGG AAGGTATCAT TCTCTATATT
AACAAAACTG GTCTGTCATA TATTGACGCC ATACGTATGG ATGAAGCAAT TGGTAAAGTC
GTTTTCGATC TTATCGCTCC CGAGTACCGT ACGCTCTGGT TAGACATGAA CCGGCGTGTA
TGTGCAGGCG ATACACTGGA ATGGGAATAT GAGGTGGTTG GGCTGAAAGG AACACGCCGT
TATCTGCAGA CACGCGCAAT ACCGCATATC ATGGCAGATG GTAGTCACGC CCAGCTGGCG
ATCACCAAAG ACATTACCGA AACCAGGGTA GCTTCACAAA TAGTGGCAGA AAATAAGAAA
AGGCTGGAAG TTAGCGAGGC AAGGTTCCGG ACATTAGCAG ACAAAATACA GAATCTTGCC
TGGATGGCTG ATGCCGATGG CAATATGTAC TGGTATAACG ACAGATGGTT CGAATATACC
GGAACAACGA TGGAGGATAT GAAAGGATGG GGATGGAAGA AACTACACCA TCCTGATCAC
CTCCAGAAAG TGATTGATTT TATTAAAGTA GCCTGGACCA AAAATAAGCC ATTTGAAATA
ACCCACATGT TACGGGGCAA GGATGGCAAC TATCGCTGGT TCCTCTCGCA GGGTACGCCC
ATCTTAGATA CTGCAGGTAA CATTATCGAA TGGATGGGTA CATTGACAGA CGTTGATGAA
CAGCAACAGT CACTGGTCCT GCTTGAAAAC AAAGTAGCGG AAAGAACAGA ACAGCTGAAT
CAGGCGAATA TGGCACTTCT CCGTTCAAAT AATGAACTGC AGCAGTTTGC ACATGTCGCC
AGCCATGACC TCAAAGAACC GGTCCGTAAG ATTGGTATCT TCACAAACCT TTTGCAGGAG
CAACTAAAAA GAGGTAATAC CGACAAAGCA GTCGCATACA GTGAGAAGAT TGAACATGCG
GCCACCAGAA TGGCAGCACT GATCGAAGGT ATCCTGCAAT ATGCCTCTGT CGACGGTCAG
CAGCAGGAGA GTATGCACGC AGATCTGAAT CAAATCATGC AATATGTTCA GACAGATCTG
GAGCTTGCCA TACAGCAGAA AGAAGCAAAG ATCATTTTTA AAGATGTGAT GCCTGTTGTA
AAGGGTATGC CTGTATTGCT GCAACAACTG TTTTATAACA TTATCAATAA TGCGCTAAAA
TTCTCCAGAC CTGATATACC TCCACAGATA GAAATTTCGG CGGGTATATT GCATGAACAG
GAAGTGATTG TCAACGGACT GAATCCAAAA CTTCAATATG TGGCTATTTG TATCAGGGAT
AACGGAATTG GCTTTGATCA AAGCAATGCG CAGAATATTT TCCGGACCTA TTATCGCCTC
AACTCAAAAG ACCAGTACGA AGGTACCGGT CTTGGATTAT CCCTCTGCCG CAAGATCGTA
GAACGTCATG GTGGTACAAT CGAAGCGGAA GGAATAGCAG GGGAAGGCGC TCTTTTCAAA
ATAGTATTGC CCGTAAAATG A
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| Protein sequence | MEAIPECVKL VSQEGIILYI NKTGLSYIDA IRMDEAIGKV VFDLIAPEYR TLWLDMNRRV
CAGDTLEWEY EVVGLKGTRR YLQTRAIPHI MADGSHAQLA ITKDITETRV ASQIVAENKK
RLEVSEARFR TLADKIQNLA WMADADGNMY WYNDRWFEYT GTTMEDMKGW GWKKLHHPDH
LQKVIDFIKV AWTKNKPFEI THMLRGKDGN YRWFLSQGTP ILDTAGNIIE WMGTLTDVDE
QQQSLVLLEN KVAERTEQLN QANMALLRSN NELQQFAHVA SHDLKEPVRK IGIFTNLLQE
QLKRGNTDKA VAYSEKIEHA ATRMAALIEG ILQYASVDGQ QQESMHADLN QIMQYVQTDL
ELAIQQKEAK IIFKDVMPVV KGMPVLLQQL FYNIINNALK FSRPDIPPQI EISAGILHEQ
EVIVNGLNPK LQYVAICIRD NGIGFDQSNA QNIFRTYYRL NSKDQYEGTG LGLSLCRKIV
ERHGGTIEAE GIAGEGALFK IVLPVK
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