Gene Cpin_2677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2677 
Symbol 
ID8358837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3273334 
End bp3273984 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content50% 
IMG OID644964859 
Productnitroreductase 
Protein accessionYP_003122360 
Protein GI256421707 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0833135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA TATTCAACCT GTCACTGATA GATGCCTTAC AGTGGCGATA TGCCGCCAAG 
CGGATGACGG GAGCGGTGGT ACCGGAAGAA CAGCTAAATA TGATCTTAAA AGCAGCCCAC
CTGGCGCCTT CCGGTATCGG GCTGCAACCT TACGAGATCA TCGTCATCAG TAACCCGCAA
CTCAGACAAC AGATACTTCC CATTGCTATG AACCAGCCAC AAGTAGTGGA GTCTTCGCAT
TTACTCGTAT TTGCGGCCTG GGATGAATAT TGTCCGGAAA GGATTGACCG GGTATTTGAT
CACCTGACAA AAGAAAGGGG GCTGGAACCA GGGGCGGCCG ACAAACAACG CCGGTTTGCC
AAACAATACT TCGGACAACT CAGCCTGGAT GAAAACTTTC ACCATGCAGC CAAACAGGCC
CATATTGCCC TCGGACTGGC AGTAGCTGCC GCTGCCCTGA ATGGGATCGA CGCAACCCCT
ATGGAAGGGT TTAATGCGAC TGCGTTAGAT GATCTCCTTC AATTACCCGC AAAAGGACTG
AAGAGTTCCA TGCTGCTGGC ATTGGGTTAC CGCAATGAGG TCAATGACTG GAACCTGCCA
TTGAAAAAGG TACGTAAGCC GTTCGAAGAA CTTGTTACAA TTTTGAGATA G
 
Protein sequence
MSKIFNLSLI DALQWRYAAK RMTGAVVPEE QLNMILKAAH LAPSGIGLQP YEIIVISNPQ 
LRQQILPIAM NQPQVVESSH LLVFAAWDEY CPERIDRVFD HLTKERGLEP GAADKQRRFA
KQYFGQLSLD ENFHHAAKQA HIALGLAVAA AALNGIDATP MEGFNATALD DLLQLPAKGL
KSSMLLALGY RNEVNDWNLP LKKVRKPFEE LVTILR