Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2677 |
Symbol | |
ID | 8358837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3273334 |
End bp | 3273984 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644964859 |
Product | nitroreductase |
Protein accession | YP_003122360 |
Protein GI | 256421707 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0833135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAAGA TATTCAACCT GTCACTGATA GATGCCTTAC AGTGGCGATA TGCCGCCAAG CGGATGACGG GAGCGGTGGT ACCGGAAGAA CAGCTAAATA TGATCTTAAA AGCAGCCCAC CTGGCGCCTT CCGGTATCGG GCTGCAACCT TACGAGATCA TCGTCATCAG TAACCCGCAA CTCAGACAAC AGATACTTCC CATTGCTATG AACCAGCCAC AAGTAGTGGA GTCTTCGCAT TTACTCGTAT TTGCGGCCTG GGATGAATAT TGTCCGGAAA GGATTGACCG GGTATTTGAT CACCTGACAA AAGAAAGGGG GCTGGAACCA GGGGCGGCCG ACAAACAACG CCGGTTTGCC AAACAATACT TCGGACAACT CAGCCTGGAT GAAAACTTTC ACCATGCAGC CAAACAGGCC CATATTGCCC TCGGACTGGC AGTAGCTGCC GCTGCCCTGA ATGGGATCGA CGCAACCCCT ATGGAAGGGT TTAATGCGAC TGCGTTAGAT GATCTCCTTC AATTACCCGC AAAAGGACTG AAGAGTTCCA TGCTGCTGGC ATTGGGTTAC CGCAATGAGG TCAATGACTG GAACCTGCCA TTGAAAAAGG TACGTAAGCC GTTCGAAGAA CTTGTTACAA TTTTGAGATA G
|
Protein sequence | MSKIFNLSLI DALQWRYAAK RMTGAVVPEE QLNMILKAAH LAPSGIGLQP YEIIVISNPQ LRQQILPIAM NQPQVVESSH LLVFAAWDEY CPERIDRVFD HLTKERGLEP GAADKQRRFA KQYFGQLSLD ENFHHAAKQA HIALGLAVAA AALNGIDATP MEGFNATALD DLLQLPAKGL KSSMLLALGY RNEVNDWNLP LKKVRKPFEE LVTILR
|
| |