Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2672 |
Symbol | |
ID | 8358832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3268134 |
End bp | 3269294 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644964854 |
Product | anti-FecI sigma factor, FecR |
Protein accession | YP_003122355 |
Protein GI | 256421702 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.228182 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAATT CGGGTAAGGA TCAACAATAC TTTTTCAAGC TGCTCAGCAG GTATAACGAA GGAAAAGTTA CACCGGAAGA AGCGGCATTT GTTGATCGTT ACCTTGAATT ACTGGATTAC CGGGAAAAAG ATGTTCTAAA AGATTTCGAC CAGCAAAAAG TCCAGATAGC GGCCAGTATG CAGGAACGGC TGCTAGAAAG CATCCGGCAT GAGCCGGTTG TAAACCGTAT ATACCCTGTA CGCAGATGGC TTACAGCAGC GGCTGCTGTC CTGTTATTAC TCGGTAGCGG ATATTATTTC TTTGAGAGGC AACATACACC GGCAAAACAT CAGACGGCTC AGCATACGGA TATTCTTCCC GGAAAAACCG GCGCCATTCT CACCTTAGCG GATGGCAGTA AAATTGTACT GGACAGTTCA CGGAACGGCG TAATCGCTAT GCAGGGTAAC ACCACAATAC AACTGAACAA CGGAAAAATA CGCTATAATA AAGGTGGCCA TGAAAGCTCC CCTGCAAGTA AGCCGGTGGG ATACAATACG ATCACTACGC CTCGTGGCCG CCAGTATCAG CTGGTATTGC CTGACGGAAC CAGTGTATGG CTGAATGCGG CCAGCAGCCT TAGCTATCCG ACTGATTTCA ATGGGAAGGA GCGCAGGGTA AGGGTAAGTG GTGAGGCTTA TTTTGAAGTT GCCAGTAATG CCAGTCAACC ATTTATAGTA ACAGTCAACG ATGCGACTAC CATCCAGGTA TTAGGCACGA AATTCAACAT CAACGCTTAC AAAGATGAAT CCAGTATTAA TACGACCTTA TTACAGGGGG CAGTAAAGGT CACCTACCGG AAGGCATCGC AACTGCTGAA ACCAGGACAA GCCGCACAGA TCAGTCAGGA GCTGCGGTTG ATACCAACAG CTGATGTCAA CGGCGTAATC GCATGGAAAG AAGGTGTATT CGCATTTAAT AATGCCGATC TGCCAACTGT CATGCGACAG CTCGCGCGAT GGTATGATAT TGAAGTGAGC TATGAGGGCA GCGTATCAGC GGCTACGTTT ACAGGGGAAA TAGATAAAAG CCTGACCTTA TCACAGGTAT TACAAGGATT AACAGCTACA AGCATCAACT ATAAAATCGA AGGAAACAGA TTAATTATTA TTCAGCATTA A
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Protein sequence | MYNSGKDQQY FFKLLSRYNE GKVTPEEAAF VDRYLELLDY REKDVLKDFD QQKVQIAASM QERLLESIRH EPVVNRIYPV RRWLTAAAAV LLLLGSGYYF FERQHTPAKH QTAQHTDILP GKTGAILTLA DGSKIVLDSS RNGVIAMQGN TTIQLNNGKI RYNKGGHESS PASKPVGYNT ITTPRGRQYQ LVLPDGTSVW LNAASSLSYP TDFNGKERRV RVSGEAYFEV ASNASQPFIV TVNDATTIQV LGTKFNINAY KDESSINTTL LQGAVKVTYR KASQLLKPGQ AAQISQELRL IPTADVNGVI AWKEGVFAFN NADLPTVMRQ LARWYDIEVS YEGSVSAATF TGEIDKSLTL SQVLQGLTAT SINYKIEGNR LIIIQH
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