Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2669 |
Symbol | |
ID | 8358829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3261990 |
End bp | 3262916 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644964851 |
Product | ABC transporter related |
Protein accession | YP_003122352 |
Protein GI | 256421699 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0475955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGTA TTGTAAAGCT GGAGCATTTA TCACATCGCT ACACCAGCTC ATGGGCAATC CGTGACATCA ATATGGAGAT CAGTCAGACT GGTATAGTAG GTCTGCTTGG TTCTAACGGC GCAGGTAAAT CCACTACGAT GAACATTCTG TGCGGCGTAC TGAACCAGAC AGAAGGTAAT GTATTTGTCA ATGGTATCAA TATGCGGGAA AACCCAGAGC TGGCAAAACA GGCTATCGGA TTTCTTCCAC AACATCCTCC TTTATACATG GACCTGACGG TAGACGAGTA CCTCACTTAC TGCGCCGGTC TGCGCCTCAT GCCAAAAGAA AAAATTCAGC CGGCATTGAA GGAAGCGAAG GAACGTTGCG GTATTGCACA TTATAGTCAG CGCCTGATCC GTAATCTTTC CGGTGGTTAC CGGCAGCGTG TGGGTATTGC GCAGGCTATT ATACACCGGC CATCACTTGT TGTGTTAGAT GAACCGACTA ATGGACTCGA CCCTAACCAG ATCATTGAAG TAAGGTCACT GATCAAAGAG ATCGCTACAG ACCGTGCGGT AATATTTTCA TCTCACATCC TGTCAGAGAT ACAGTTGTTG TGCAAGGAGA TCAAAATGAT AGAAAGCGGT AGAATTGTGT TTGCAGATAC AATGGACGCC TTCAATAACT ATGTCGAACC ACACAGTGTG CTACTCCATA TGGAGAACCC TCCACCGGTG GCAGCATTCA TGGAGATAGC CGGTGTTACT AAAACAGAGT TTCTGACGGA AAGACAGGTA CGCATTTATT TCAGTGGAGA TCAGGATATA TCAGAACGTC TCATCACTGC AAGTGTACAA CAAGGCTGGA GACTGAGAGA GATCAGTCTT GATAAGACCG CTCTGGACGA AGTATTTAAA CAATTATCCA ATCAATCATC ACAATAA
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Protein sequence | MNSIVKLEHL SHRYTSSWAI RDINMEISQT GIVGLLGSNG AGKSTTMNIL CGVLNQTEGN VFVNGINMRE NPELAKQAIG FLPQHPPLYM DLTVDEYLTY CAGLRLMPKE KIQPALKEAK ERCGIAHYSQ RLIRNLSGGY RQRVGIAQAI IHRPSLVVLD EPTNGLDPNQ IIEVRSLIKE IATDRAVIFS SHILSEIQLL CKEIKMIESG RIVFADTMDA FNNYVEPHSV LLHMENPPPV AAFMEIAGVT KTEFLTERQV RIYFSGDQDI SERLITASVQ QGWRLREISL DKTALDEVFK QLSNQSSQ
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