Gene Cpin_2669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2669 
Symbol 
ID8358829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3261990 
End bp3262916 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content45% 
IMG OID644964851 
ProductABC transporter related 
Protein accessionYP_003122352 
Protein GI256421699 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0475955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGTA TTGTAAAGCT GGAGCATTTA TCACATCGCT ACACCAGCTC ATGGGCAATC 
CGTGACATCA ATATGGAGAT CAGTCAGACT GGTATAGTAG GTCTGCTTGG TTCTAACGGC
GCAGGTAAAT CCACTACGAT GAACATTCTG TGCGGCGTAC TGAACCAGAC AGAAGGTAAT
GTATTTGTCA ATGGTATCAA TATGCGGGAA AACCCAGAGC TGGCAAAACA GGCTATCGGA
TTTCTTCCAC AACATCCTCC TTTATACATG GACCTGACGG TAGACGAGTA CCTCACTTAC
TGCGCCGGTC TGCGCCTCAT GCCAAAAGAA AAAATTCAGC CGGCATTGAA GGAAGCGAAG
GAACGTTGCG GTATTGCACA TTATAGTCAG CGCCTGATCC GTAATCTTTC CGGTGGTTAC
CGGCAGCGTG TGGGTATTGC GCAGGCTATT ATACACCGGC CATCACTTGT TGTGTTAGAT
GAACCGACTA ATGGACTCGA CCCTAACCAG ATCATTGAAG TAAGGTCACT GATCAAAGAG
ATCGCTACAG ACCGTGCGGT AATATTTTCA TCTCACATCC TGTCAGAGAT ACAGTTGTTG
TGCAAGGAGA TCAAAATGAT AGAAAGCGGT AGAATTGTGT TTGCAGATAC AATGGACGCC
TTCAATAACT ATGTCGAACC ACACAGTGTG CTACTCCATA TGGAGAACCC TCCACCGGTG
GCAGCATTCA TGGAGATAGC CGGTGTTACT AAAACAGAGT TTCTGACGGA AAGACAGGTA
CGCATTTATT TCAGTGGAGA TCAGGATATA TCAGAACGTC TCATCACTGC AAGTGTACAA
CAAGGCTGGA GACTGAGAGA GATCAGTCTT GATAAGACCG CTCTGGACGA AGTATTTAAA
CAATTATCCA ATCAATCATC ACAATAA
 
Protein sequence
MNSIVKLEHL SHRYTSSWAI RDINMEISQT GIVGLLGSNG AGKSTTMNIL CGVLNQTEGN 
VFVNGINMRE NPELAKQAIG FLPQHPPLYM DLTVDEYLTY CAGLRLMPKE KIQPALKEAK
ERCGIAHYSQ RLIRNLSGGY RQRVGIAQAI IHRPSLVVLD EPTNGLDPNQ IIEVRSLIKE
IATDRAVIFS SHILSEIQLL CKEIKMIESG RIVFADTMDA FNNYVEPHSV LLHMENPPPV
AAFMEIAGVT KTEFLTERQV RIYFSGDQDI SERLITASVQ QGWRLREISL DKTALDEVFK
QLSNQSSQ