Gene Cpin_2650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2650 
Symbol 
ID8358810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3240755 
End bp3241150 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content50% 
IMG OID644964832 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_003122333 
Protein GI256421680 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0865936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGTT GCTATCAGCT TGCCGACATA GCCGCAAAAG AAGGTGAAAG TCCGGTAGGC 
AGTGTTATCG TCAAAGATGG CATCATTATC GGAGAAGGTT CAGAGAAGAG CAAACAACAG
AAAGACATTA CCCGCCATGC TGAAGTAGTG GCGATCCTGG ACGCCTTGCG CAATACAGAC
AGCCTGGCCG GATCCGTCTT ATATACAAAT GTGGAGCCTT GCCTGCTCTG CTCCTACGTC
ATCCGTCATT ATAAGATCGC GGAAGTAGTG TTTGCCAGAC ACTCCGGAGA ACTGGGTGGC
ACACATCAGC CTTTCGATCT GCTGACGTCT CCTGATTTTA AGTCCTGGGC CCAACCACCG
GTCATCACTA TATATGAAGA GAAAGCAACT CATTGA
 
Protein sequence
MARCYQLADI AAKEGESPVG SVIVKDGIII GEGSEKSKQQ KDITRHAEVV AILDALRNTD 
SLAGSVLYTN VEPCLLCSYV IRHYKIAEVV FARHSGELGG THQPFDLLTS PDFKSWAQPP
VITIYEEKAT H