Gene Cpin_2645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2645 
Symbol 
ID8358805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3236519 
End bp3236878 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content47% 
IMG OID644964827 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003122328 
Protein GI256421675 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.512568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAA AAACGGAAGA CAGACAATCA CAACCAATAT CTGAAGAACA GCCACCCAAT 
CCGATGATGG AAGCGATGCA GGCGATCGGG GGTAAATGGA AACTGTTATT GCTGGATACG
ATCCGCCGGG AATGCCCGAA ACGTTTCGGT GAGTTGCGCA GAGAAATGGA ACATATTACG
CATACGACAC TGACCGCACA GTTACGTGAG CTGGAAAGAG ACGGTATTCT CACAAGAGAA
GTATTTCCGG AAGTACCGCC AAGGGTAGAA TATAAACTGA CCGAATTGGG TAAACAACTG
ATCCCGATCA TGGATGCCCT GTGTGCATGG GGAGAATTGT ACGGCAAAGA GAAACCGTAA
 
Protein sequence
MQKKTEDRQS QPISEEQPPN PMMEAMQAIG GKWKLLLLDT IRRECPKRFG ELRREMEHIT 
HTTLTAQLRE LERDGILTRE VFPEVPPRVE YKLTELGKQL IPIMDALCAW GELYGKEKP