| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2628 |
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| Symbol | |
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| ID | 8358788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3221190 |
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| End bp | 3221747 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644964810 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003122311 |
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| Protein GI | 256421658 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.512867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGATG AAAAGGAACT AATTCCCCGC ATCTTACATG GAGATATGAA AGCTTTTGAG
GTATTGGTAA CGCAATATCA GGGGCTGGTA TTCCATGTGG TGAACAGGAT CATCAATACG
CAGGAAGACA AGGAAGATAT CTGTCAGGAG GTATTTATCA AGGTGCACCA GCACCTGCGG
CGCTTTGAGT ATAAGTCCCG CCTGTCTACC TGGATTGCCC GTATCGCCTA TCTGACGGCT
ATTAACTACA GTAAAAAGTA TAGTAGTGGT CGTACGGTAT CTCACCCGGA GGATATTGAA
AATTATAGCT TTACGGATGA ACATCCTGGC GGCCTGCTGG ATAAAAAGGA CGTGACGGCC
TATGTTAACC GCCTGATCGC CCAGATGCCT GAACAATACA GAACGGTATT GACGTTATAT
CATCTGAATG AGTTTTCTTA CCAGGAGATA GAAGAAATAA CCGGTATGCC GGAAGGAACC
GTGAAAAGTT ATCTTTTCCG TGGACGTAAA TTGCTGAAGG ATAAATTAGG TGTTTATCTT
AAAAATGAGG TATCATGA
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| Protein sequence | MIDEKELIPR ILHGDMKAFE VLVTQYQGLV FHVVNRIINT QEDKEDICQE VFIKVHQHLR
RFEYKSRLST WIARIAYLTA INYSKKYSSG RTVSHPEDIE NYSFTDEHPG GLLDKKDVTA
YVNRLIAQMP EQYRTVLTLY HLNEFSYQEI EEITGMPEGT VKSYLFRGRK LLKDKLGVYL
KNEVS
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