Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2626 |
Symbol | |
ID | 8358786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3218467 |
End bp | 3220614 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644964808 |
Product | ferrienterochelin/colicin outer membrane receptor |
Protein accession | YP_003122309 |
Protein GI | 256421656 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.33425 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAAAC TGTTATTATA CCTTGCCTGT AGTATTCCCT TACTGCATGT CAGTCTGACA AGTCAGGCCC AGACAGCAGA CACCCTCCGC AGCCGGGGAC TTAAAACGGT GACTGTCACC GGACAAAAAC CACTAATCCG ACAGGAGGTA GACCGCCTCA TATACGACCT CCAGGCAGAT CCCGACAGCA AAGGCAGTAA TCTGCTGGAG ATCATGCGAA AGGTGCCTTT TCTGTCTGTG GATGCTTCCG GTAATCTATT ACTAAAGGGG AACAGTAGTT ATAAGGTGCT GATTAATGGG AAGGAGTCAG GTATGTTTGA AAGAGATCCC GCTATGGTAC TGCGAACAAT TCCTGCTTCT ACGATACAGC ACATAGAGGT GATTACCACA CCACCGTCGA AGTATGACGG AGAAGGATTA ACAGGGATCA TCAACATTGT TACTATCAGG CGTAAAGCAG ATGGGTATAA CGGAACGATT AACATCAGTG AGCGCTTTCC GGCCAATGGA CCGGGTGCAG GTGGTTCATT CGCTATGAAA GAGGGGAATC TGGGCATCTC TGTTTATGGC GGAGCAGGGT ATGATCGTCG TCCACATGCG CGCAATGATA TGCAGCGAAC GGCTTATGCC AAGGTACCCA TTACGCTGTT ACAGGAAGGC GACCGGCATA ACCATCGTAG CAATGGGTAT TTCGGCACAG AGCTAAGTTA TGCGGTAGAC ACCCTGCATC TGTTGACTGC ACAATTCAAT TTCAATGCTT ACGGCGGAGC AGGAGAAGAT CAGCTGCTTT CCCGTATGAT CAGCGGTGGC AATGTTAACC AGCAATATGC CATGCACAGC AGCAATAACA ATCATGGCAA TGGGATGGAT GCCGGGATCA ATTATCAGAT CACTTCTCCT GAACATAAAA ACAACCTGAT TACCTTTTCT TACCGTTATG CCACCAATGG CAGAAAGCAG GCGTATGAAC AGCAATTTAC AGCTACAATC AACTATGATA TTTCCGGTTA CCTGCAAGAC AATGATGAGC AATTCAGGGA GCATACGTTA CAGGCAGATT ATGTTCGTAC CTTTCGGTAC TTCAGTATGG AAGCAGGCGT AAAGGGTATA TGGCGTAGCA ATTATAGTGA TTATCTCAAT GCCTACCTGT CAGCTGATCC TGTCTCAAAC GGGTTTGACG GACAGCAACG CGTATTCAGT GTATATAATG CGTATACTTT CTCTTCAAAA CACTGGGACC TGAAGGCGGG TTTACGTGCG GAACAGACCT TTATGGAAGC CAGCTGGCAA AGTGATTCTG TGAGACTGCA CAAGCAATTT CTTAACCTGA TTCCATCGGT AGTCATCAAC AGAAAGTTGG GTAATAACAG TTCGCTGAAC CTGGGCATTT CCCGACGCCT GAAACGACCT AATATCTACA AGCTTAATCC ATTTAAAGAC CGCTCCAATC CCTCGCAGGA ATCATCCGGG AATCCGGCAT TACGTCCGAC GCTGACTACG AACGTTCAAC TGGGATATAG CTGGTCAGGG AACCTATCTT TTAATGCGGC TGTCAGCTAT GCGTTCCTCA ACAATATGTT TATGGAGATT ACCTCCTATG ATACCGCCCG GAATATTACC ACTACAAGCA TCGAAAATAA TGTCAGGGGT AGTGGTTTAG GATTTGACTA TACCATCAAC TATCCGGTTA CCAAATGGCT GAACCTGGGT ATTAACGGCA ATGCGGTTTA TCTTTCATTG GATGGCGCGA GCAACGCTGC CCCTATTGCG CTGCACAGAT GGAATTATGC TATCAACGGA AATGCATCTG TACGCCTGAA TAAAGGCTGG AAACTGAATA CGTCGTTAAA TATAACCGGA CGTAACCAGG CGTCCTTACA GGCGACCAAT AATGCTGTTA CTGCTATTAC CATCGGAGGC AGTAAAGATC TGATAAAAGA TAAACTGACC TGTTCTGCTG GTATCAGCAA TCCATTTCAG GCATACAGAC AGAACCGTAC AGCGCTCTCA GATAAACTAT TTACGCAATA CAACAACACA CAGGAATATT TCCGGACGGT CAATGTGAGT ATCAACTACA ATTTCGGCAG ACTGAAGCAA GCTATCCAAA AGAATAGGCG CGGTATCAGG AACGACGACG GTAATTAA
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Protein sequence | MYKLLLYLAC SIPLLHVSLT SQAQTADTLR SRGLKTVTVT GQKPLIRQEV DRLIYDLQAD PDSKGSNLLE IMRKVPFLSV DASGNLLLKG NSSYKVLING KESGMFERDP AMVLRTIPAS TIQHIEVITT PPSKYDGEGL TGIINIVTIR RKADGYNGTI NISERFPANG PGAGGSFAMK EGNLGISVYG GAGYDRRPHA RNDMQRTAYA KVPITLLQEG DRHNHRSNGY FGTELSYAVD TLHLLTAQFN FNAYGGAGED QLLSRMISGG NVNQQYAMHS SNNNHGNGMD AGINYQITSP EHKNNLITFS YRYATNGRKQ AYEQQFTATI NYDISGYLQD NDEQFREHTL QADYVRTFRY FSMEAGVKGI WRSNYSDYLN AYLSADPVSN GFDGQQRVFS VYNAYTFSSK HWDLKAGLRA EQTFMEASWQ SDSVRLHKQF LNLIPSVVIN RKLGNNSSLN LGISRRLKRP NIYKLNPFKD RSNPSQESSG NPALRPTLTT NVQLGYSWSG NLSFNAAVSY AFLNNMFMEI TSYDTARNIT TTSIENNVRG SGLGFDYTIN YPVTKWLNLG INGNAVYLSL DGASNAAPIA LHRWNYAING NASVRLNKGW KLNTSLNITG RNQASLQATN NAVTAITIGG SKDLIKDKLT CSAGISNPFQ AYRQNRTALS DKLFTQYNNT QEYFRTVNVS INYNFGRLKQ AIQKNRRGIR NDDGN
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