Gene Cpin_2626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2626 
Symbol 
ID8358786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3218467 
End bp3220614 
Gene Length2148 bp 
Protein Length715 aa 
Translation table11 
GC content46% 
IMG OID644964808 
Productferrienterochelin/colicin outer membrane receptor 
Protein accessionYP_003122309 
Protein GI256421656 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4771] Outer membrane receptor for ferrienterochelin and colicins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.33425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAAC TGTTATTATA CCTTGCCTGT AGTATTCCCT TACTGCATGT CAGTCTGACA 
AGTCAGGCCC AGACAGCAGA CACCCTCCGC AGCCGGGGAC TTAAAACGGT GACTGTCACC
GGACAAAAAC CACTAATCCG ACAGGAGGTA GACCGCCTCA TATACGACCT CCAGGCAGAT
CCCGACAGCA AAGGCAGTAA TCTGCTGGAG ATCATGCGAA AGGTGCCTTT TCTGTCTGTG
GATGCTTCCG GTAATCTATT ACTAAAGGGG AACAGTAGTT ATAAGGTGCT GATTAATGGG
AAGGAGTCAG GTATGTTTGA AAGAGATCCC GCTATGGTAC TGCGAACAAT TCCTGCTTCT
ACGATACAGC ACATAGAGGT GATTACCACA CCACCGTCGA AGTATGACGG AGAAGGATTA
ACAGGGATCA TCAACATTGT TACTATCAGG CGTAAAGCAG ATGGGTATAA CGGAACGATT
AACATCAGTG AGCGCTTTCC GGCCAATGGA CCGGGTGCAG GTGGTTCATT CGCTATGAAA
GAGGGGAATC TGGGCATCTC TGTTTATGGC GGAGCAGGGT ATGATCGTCG TCCACATGCG
CGCAATGATA TGCAGCGAAC GGCTTATGCC AAGGTACCCA TTACGCTGTT ACAGGAAGGC
GACCGGCATA ACCATCGTAG CAATGGGTAT TTCGGCACAG AGCTAAGTTA TGCGGTAGAC
ACCCTGCATC TGTTGACTGC ACAATTCAAT TTCAATGCTT ACGGCGGAGC AGGAGAAGAT
CAGCTGCTTT CCCGTATGAT CAGCGGTGGC AATGTTAACC AGCAATATGC CATGCACAGC
AGCAATAACA ATCATGGCAA TGGGATGGAT GCCGGGATCA ATTATCAGAT CACTTCTCCT
GAACATAAAA ACAACCTGAT TACCTTTTCT TACCGTTATG CCACCAATGG CAGAAAGCAG
GCGTATGAAC AGCAATTTAC AGCTACAATC AACTATGATA TTTCCGGTTA CCTGCAAGAC
AATGATGAGC AATTCAGGGA GCATACGTTA CAGGCAGATT ATGTTCGTAC CTTTCGGTAC
TTCAGTATGG AAGCAGGCGT AAAGGGTATA TGGCGTAGCA ATTATAGTGA TTATCTCAAT
GCCTACCTGT CAGCTGATCC TGTCTCAAAC GGGTTTGACG GACAGCAACG CGTATTCAGT
GTATATAATG CGTATACTTT CTCTTCAAAA CACTGGGACC TGAAGGCGGG TTTACGTGCG
GAACAGACCT TTATGGAAGC CAGCTGGCAA AGTGATTCTG TGAGACTGCA CAAGCAATTT
CTTAACCTGA TTCCATCGGT AGTCATCAAC AGAAAGTTGG GTAATAACAG TTCGCTGAAC
CTGGGCATTT CCCGACGCCT GAAACGACCT AATATCTACA AGCTTAATCC ATTTAAAGAC
CGCTCCAATC CCTCGCAGGA ATCATCCGGG AATCCGGCAT TACGTCCGAC GCTGACTACG
AACGTTCAAC TGGGATATAG CTGGTCAGGG AACCTATCTT TTAATGCGGC TGTCAGCTAT
GCGTTCCTCA ACAATATGTT TATGGAGATT ACCTCCTATG ATACCGCCCG GAATATTACC
ACTACAAGCA TCGAAAATAA TGTCAGGGGT AGTGGTTTAG GATTTGACTA TACCATCAAC
TATCCGGTTA CCAAATGGCT GAACCTGGGT ATTAACGGCA ATGCGGTTTA TCTTTCATTG
GATGGCGCGA GCAACGCTGC CCCTATTGCG CTGCACAGAT GGAATTATGC TATCAACGGA
AATGCATCTG TACGCCTGAA TAAAGGCTGG AAACTGAATA CGTCGTTAAA TATAACCGGA
CGTAACCAGG CGTCCTTACA GGCGACCAAT AATGCTGTTA CTGCTATTAC CATCGGAGGC
AGTAAAGATC TGATAAAAGA TAAACTGACC TGTTCTGCTG GTATCAGCAA TCCATTTCAG
GCATACAGAC AGAACCGTAC AGCGCTCTCA GATAAACTAT TTACGCAATA CAACAACACA
CAGGAATATT TCCGGACGGT CAATGTGAGT ATCAACTACA ATTTCGGCAG ACTGAAGCAA
GCTATCCAAA AGAATAGGCG CGGTATCAGG AACGACGACG GTAATTAA
 
Protein sequence
MYKLLLYLAC SIPLLHVSLT SQAQTADTLR SRGLKTVTVT GQKPLIRQEV DRLIYDLQAD 
PDSKGSNLLE IMRKVPFLSV DASGNLLLKG NSSYKVLING KESGMFERDP AMVLRTIPAS
TIQHIEVITT PPSKYDGEGL TGIINIVTIR RKADGYNGTI NISERFPANG PGAGGSFAMK
EGNLGISVYG GAGYDRRPHA RNDMQRTAYA KVPITLLQEG DRHNHRSNGY FGTELSYAVD
TLHLLTAQFN FNAYGGAGED QLLSRMISGG NVNQQYAMHS SNNNHGNGMD AGINYQITSP
EHKNNLITFS YRYATNGRKQ AYEQQFTATI NYDISGYLQD NDEQFREHTL QADYVRTFRY
FSMEAGVKGI WRSNYSDYLN AYLSADPVSN GFDGQQRVFS VYNAYTFSSK HWDLKAGLRA
EQTFMEASWQ SDSVRLHKQF LNLIPSVVIN RKLGNNSSLN LGISRRLKRP NIYKLNPFKD
RSNPSQESSG NPALRPTLTT NVQLGYSWSG NLSFNAAVSY AFLNNMFMEI TSYDTARNIT
TTSIENNVRG SGLGFDYTIN YPVTKWLNLG INGNAVYLSL DGASNAAPIA LHRWNYAING
NASVRLNKGW KLNTSLNITG RNQASLQATN NAVTAITIGG SKDLIKDKLT CSAGISNPFQ
AYRQNRTALS DKLFTQYNNT QEYFRTVNVS INYNFGRLKQ AIQKNRRGIR NDDGN