Gene Cpin_2625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2625 
Symbol 
ID8358785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3217423 
End bp3218406 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content47% 
IMG OID644964807 
Productaldo/keto reductase 
Protein accessionYP_003122308 
Protein GI256421655 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.353531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACA GGAAATTAGG AAACACAGAT GTCTCTCTCT CCGCTATCGG ATTGGGATGC 
ATGGGCATGA ACCATGCTTA TGGAGAAGCC AATGATGCTG AATCCATCGC TACATTGGAA
CATGCTATAG CGCTCGGCGT TACATTCTGG GATACGGCCG ATATTTACGC TAATGGTAAA
AATGAGGAAC TGGTGGCAAA AGTGTTGAAG CCAAACCGTT CTAAAATATT CCTTGCTACC
AAGTTCGGAT TTACTTTCAC GGATGGACAA CCCGGCGGGT TTGATGGCTC ACCGGCATAT
ATGCGCAAGG CGGTTACGGA TAGTCTGAAA AGATTACAGA CAGATGTGAT TGATCTTTAC
TATGTGCATC GCGTAGACCC CAAGATACCA ATAGAGGAGA CTGTGGGTGC GATGGCAGAA
CTGGTAAAAG AAGGAAAAGT ACGTTATCTG GGATTGTCAG AGGCAGGCGT GAATTCTATT
CGCAAGGCCC ATGCGGTACA TCCTATTTCG GCTTTGCAGA GTGAATACTC TCTGCTGACA
AGAGATGTGG AAAAGGAGAT TATTCCGTTG TGCAATGAAC TTAAGATCAG TTTTGTGCCT
TTTAGTCCGC TGGCACGTGG TCTTGTGACC AATACCCTGG ATCTGGGCGC ACTGAAGGAT
AATGATTTCA GGAAGTCGCT TCCCCGTTAT CAGGCGGCAC ATGCCGATAA TAATCAGCAA
CTGGCAGCTG CATTCGCAGA ACTGGCGGCA GCTAAAAACT GTACGGCAGC GCAACTGGCT
TTGGCGTGGG TGTTGAATCA GGATGAAAAC CTGATACCTA TTCCAGGTAC TAAACGCAGG
AAATACCTGG AAGAGAATGC GGCGGCGGTG GATATCAGCT TATCTGATGC AGATAAAAAG
GAGATTGATG CTTTACTGGC GAAGTATCCG GATACCGGCG AAAGGTATGG AGCTGCACAG
CAACAGCTGG TAGACAGAAG TTAA
 
Protein sequence
MKYRKLGNTD VSLSAIGLGC MGMNHAYGEA NDAESIATLE HAIALGVTFW DTADIYANGK 
NEELVAKVLK PNRSKIFLAT KFGFTFTDGQ PGGFDGSPAY MRKAVTDSLK RLQTDVIDLY
YVHRVDPKIP IEETVGAMAE LVKEGKVRYL GLSEAGVNSI RKAHAVHPIS ALQSEYSLLT
RDVEKEIIPL CNELKISFVP FSPLARGLVT NTLDLGALKD NDFRKSLPRY QAAHADNNQQ
LAAAFAELAA AKNCTAAQLA LAWVLNQDEN LIPIPGTKRR KYLEENAAAV DISLSDADKK
EIDALLAKYP DTGERYGAAQ QQLVDRS