| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2618 |
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| Symbol | |
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| ID | 8358778 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3206873 |
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| End bp | 3211427 |
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| Gene Length | 4555 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 645945096 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000568245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.768348 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCA ATATAAAAGC ATTGCAGCTG TTGATAATGG TACTGCTTTC CTTTGGTGGC
AAAACAACGG CACAGCTTAC AGATTATAAC AACAATAAAG AAAAGATCTA CATACAAACC
AGTCACGTAT TCTTCAAACC AGGCGAGGAC CTTTTTTTCA AGATCTACCT GGTGAACGCA
AAAAATCAGT TCATCTCTGT ACTAAGCAAC GTTGTGTACG TAGAGATCGT AGGACCTGCG
GGAAATATTA TACAAACACA CAACTATCAT GTGGAGGATG GCTATGCAAC AGGTCACTAT
AAGTTTGACG CATCCGCCAA TGGCGGTATT TATAAGCTCA GGGCATACAC CACCTGGATG
AAAAATGAGA AAGAAAGCAC CTGGTTTACA AAAGAGGTTA CTGTTCAAAA GGTGATTGCT
CCCCGTGTGT TGATGAAACT GGACTTTCCT CAAAAAGGGT ATGGCCCGGG AGATGAAGTA
AGCGCCTTAT TCTATCCGTA GTCTTGCAGA TCGTCCTATC ACCGGATATG AAACCAAATT
CACGGTATCA CTGGGAGGTA AAGCTGTTAA GACAGGTACT TTTAAGACCG ACAGCAAGGG
GAAGGCAGAT GTCAGATTCA AACTACCGGC TGACCTGGAG ACCAATGACG GCCTGCTAAA
TATTACGATC AATTTTGACG GCTATACAGA AGCTATCTCC AGAAGCATCC CTATCGTACT
GAATAAAGTC GACCTGCAAT TTATGCCGGA AGGTGGCACC CTGGTAGATG GATTATCTAC
CAATATAGCC TTCAAAGCCA TTAATGAATT TGGCAAACCA GCTGATGTAA AAGGCGAAAT
TAAGGACGAT AACAACAATA CCGTCGCTAC GTTTGAAAGC TTTCATGACG GTATGGGACA
GCTGGCATTC ACGCCAGAAC CAGGCAAAAA ATACAGAGCG GTATTAGCCA AGCCTGCCGG
CGTTCGTCAA CATTTTGATC TTCCTGCTGC CGCGAAGCAA GGGCTTGTGA TGAACGTGAG
TAAAAAAGGG AAGTTATTGC AGTTCAATAT TGCAGTAACC CGGGATATAA ATGTAAAACT
GGTAGGACAA AGCAAGAATG ACGTGCATTA TCTTCAGGAA TTATCGCTCA GGAAAGGCAC
ACAGGTCGTT GAGGTAGATG CAGAAAAGTT CCCTGTCGGT ATAGCCCGGT TCACGATTAC
AACCAATACG CGGCTTCCGC TGGCAGAGAG ACTTGTATTC CTGCATCCTG ACAGAAAACT
ACAGGTAAAG ATCACTGCTG ACAAAGAACG TTATCAACCA AGAGAGAAAG TCACCTTACA
TTTAAAAACG CTGGACGAAG CCGGTAAGCC GGTGGCTTCT AATTTCTCAC TGGCTGTAAT
GGATGATAAA CTGTGGTCAC TGGCTGATGA TAAACAGGAC CATATTCTCT CCTGGCTACT
CATGGGTTCC GAATTACATG GTAAGGTAGA AGAGCCTCAA TTTTACTTCA AAGATGAGGA
AAAAAAGGCC ATTCCGGCAC TGGATCTGGT GATGTTGACC AATGGCTATC GTTACTTTGA
TTACATTGAC TACCTGGAAA AAACAGGCAG ACCTAAATTT AGCCCCGACC TCAATAATAT
TATCACTGGT GTGATTGTAG ATAAAAACGG TAAGCCTGTA AAATCAACCG TCTATTTGCT
GAGCAGTATT AATCGTTACA ACTATGATCA GGGCGAGGTT ATTCAGCAGG CAACAGCAGA
TGATGGGGTT TTCTTCTTTA CAGATATTAC CTCTGCGTTC AGCTATCATT TACTGGCCTC
CTCTGCCCGC AAAAGAGAAC CTGTCAGTAT TAAGTTGTTA AGAGAGGGCG TGGATTATAT
CCCTAGCCCC GCCCGAAAGG TAAAAGACCC TTTTGAAGAC GATCGTCTGC CACCACCGCT
GCTGGCAGAA AGAGGGAATA AAGATAAAGT AGAGATGATG GAGGATGTCT TTAAAGAAAA
AAAACAGGCG CCAAATAAGC CTGACAATTT CGCTATAGGG AAAATGAATG ACCGTAGTCT
GAATGAAGTG GTTGTGGTGG CGTATAATCA GACAACCAAG CGCATGATAA CAGGATCCAT
TACAACAGTT AAAGCACAGG ATCTTACAAG CACCGATGTG CTTTCTGTAT TGCAGGGAAG
GGTTTCGGGC CTGGAAGTCA CAAGGCCGAC CGGTGCTGGC GGAGCGACCA TAGTGATCAG
AGGTGTTTCA TCATTACCCC AAAACGATCA ACCGCTGATA GTCCTGGATG GCGTACCGAT
ATCAAAAATA TCCGATATAG TCAACCGGGA AGATATTGAT TATATAGAAA TACTCAAAGA
TGCTGACGCA ACAGCTATTT ATGGTAGCAG AGGCGCTAAT GGTGTCATCT TGATTACTTC
CAAAAACAAT AAACGCCCGT CTATTGTATT CAACCTGGAA CGCACCGATT ACTATGCATC
ACAGACAGTA CAACTTAAAA AAGATCAATA TACGATAGCC AAACACTTTT ATGCTCCCAA
ATACCTGTCT CCCAATACGA CAAAAAGGGA TGATTTCCGG GAAACGATTT ACTGGAATCC
GGTTGTACAG ACCAATAAAG ATGGAGATGC CAGTGTGGAA TTTTACAACT CTGACGCCAA
TACTACTTTT CGCGCTATCG CAGAAGGTAT CGGCTTCAAT GGTAAGCTGG GACGAGCAGA
AAAGACATAT GCAGTACAAT CTCCTTTGAC AGTAGACGCT AAACTGCCTC CTTACATGAC
TGCTGGTGAT ATTGTACAAA TTCCGCTGGT AATAAAAAAC AATACGGACA AAGCCATCAC
CGCCAAAATT GACATCAGTC TTTCCGGCGA TATTGAACTG CGACCTTACC TTGACACCAT
CAACATTCCA TCAGATAGTG CCGTTCAGGT ACCAGTTACT GTCAGGGCAC GTACTGCGAC
AAATGGATCC TTTTCCTGTA AAGTAATGGC GGGAGACAAT AAGGAAAGTC TGTATCTGCC
AGTCAGTGTC ACCAGTAAAG GTTTCCCTGT GACCACGACA ATATCGGGCA ACAGATCAAA
AGAAACCAAT TTCACCATCC ATCATATGCT TGAAGGAACA CTGGCTACCG AACTGAAGGT
ATTTACAAAG ATGGAAGACC GTCTGTTGAG TGACGTAGAA GCCATGTTAA GGGAGCCATA
TGGTTGTTTT GAGCAGACCT CCTCTACTAC TTATCCCAAT ATCTACATTC TGAAATTACT
GCGTTCTTCG GCTAAAAAAC ATACAGCAGC AGAGCAAAAA GCGATGGACT ATCTTATCAC
CGGCTATAAA CGGTTGATAG GTTTTGAGAC AGCGGAACAT GGCTTTGAAT GGTTTGGCCG
CACGCCGCCT CATGAGGCAT TAACAGCTTA CGGATTACTG GAGTTTACAG CCATGAATGA
GTTCATTAAA GTGGACAAAG GTATGCTGGA ACGCACACAG CAATTCCTGC TGGGACGCAG
AGATAAAAAA GGGTCCTTCA ATATCCATAA GCAGGGACTG GACGCATTTG CATCAGTACC
AGATAAAATC GCAAATTGCT ACATCGTATA TGCACTAACT GCTTCCGGTA TCAAAAACGA
GATCAAACTG GAATATGAAA CCGCTGTTAA AAAAGCGCTG GAAAGCAACG ATGCTTATCT
GTTATCGATG ATGGCACTGG CAGCCAGCAA TATGGGCCGT GCAGATGATT TTAATACACT
GCTGGCTGCA GCCAAAGAAG CGAAACTGAA TGCCACAACA ACCGTGGTTA ACTCCAGGAG
CAGTTCCTTA CGTGTAGAGA CCATGGCGTT GTATGCTTTG GCGCTCATGA AAGAAAAAAC
GCCTGACATA GGTAGCATTT CCAATCTGAT TGCTGATATC ATGAAACAGA AGAGCTATTA
CGGATACGGC TCTACACAGG GCACCGTACT GGCACTACAG GCAATATGCG GCTATCAGCA
ACTGATAGGC GATCAGATAG CAGGTTCGCA GATGGAAATA AAAGTGAATA ACAAAACTAT
TTATGCCGGC GCCAGCGCAA CATCTTCCAT TAACAATATC GTTGAAGGAG AAAATACATT
CTCGATCAAA TATAAGGATG AGAAAGCCAA TGCGCCTTAT CAGCTGGAAC TGGCTTATTT
CACATCCTTA CCACCTAATG ACGCTCAGGC AGAACTGCAA CTGGCGACTG AATTATCTAC
CAGTCAGACG AAAGTAGGAG AAACTGTCAG GATGCAGGTG GCAGTGAAGA ATATCAAAAA
TATCCTTCAG CCAATGAGCA TTGTAAAAGT GGGTATTCCT GCCGGTCTGA CCGTACAGCC
ATGGCAATTA AAAGAAATGA TGGAGCAGGG ACAGATCGCT TACTATGAGA TATTTGACAA
CTATCTGGTA TTGTACTGGA TGGGTTTTGC ACCAGAAGAA ACCAAGAAGG TGAACTTCGA
CCTGAAGGCT GAAATAGCCG GTAAATACAA AGGAAAGGCA AGCACCACCT ATTTGTATTA
TACCCCGGAA TTCAAGCACT GGAATGCAGG TACCGAAATT ACCATCGAAC CTTAA
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| Protein sequence | |
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