| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2582 |
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| Symbol | |
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| ID | 8358742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3161553 |
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| End bp | 3162692 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644964765 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003122266 |
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| Protein GI | 256421613 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000306136 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.19553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCATC CTTACACGAA TAATATGAAC AGTCTTAAAG CACTTGCTAT CACAATAAGT
TTACCTGCCA CACTGCTGTT CAGCAGCTGT AGTCACACAG AAGGTAAATC AGAAAATAAA
GAAAACGCAC AGGAGGAAGC TCCTGTTGCA GCAATATCCC TGCAAAAAGG TAAACTCGCC
TCTTCTCTGC AACTGCCTGG TGAGCTGATT GCTTATCAGC AGGTAGATAT CTATGCGAAG
GTGAGCAGCT TTGTAAAAAA GCTGCATGTA GATGTGGGTA CGGAAGTAAG TCAGGGACAA
CTGCTGGCTA CAATGGAAGC ACCAGAGATC AGTTCTCAGC TGGCCGGTGC AGAATCCAGG
ATCAAATCAC AGGAGGCGGT ATACCTGGCG AGCAAAGCTA ATTATGACCG TTTGTATAAT
ACCAGTCTGA CACCAGGTAC CGTTTCCAAA AACGACCTGG ATATAGCGCA GGCGCGTATG
AAATCAGACC TGGCACAATG GGATGCCGGT AAGGCTGCTT ACAGGGAGAT CTCTGACAAC
AGAAACTATC TGGAGATCAG AGCACCATTT TCCGGCGTTA TCAGTGCAAG AAATGTGAGT
GCGGGCGCTT ATGTTGGTCC GACAGGAAAA GGCTCTGAAT TGCCTTTATT TACCCTTCAG
GAGCAAAAGA AACTGCGTCT GGTAATCTCC GTTCCGGAAT CTTATACTGC TTACCTGAAC
AGCAGCAGCG AGGTGAAGTT CAATGTGAAA GCATTTACCG GTCAGCAGTT TACTGCGAAG
GTAAACCGTC TTTCCGGTGC ACTGGATGCC CGTCTGCGTT CACAGCGTAT TGAAATGGAT
GTGATCAATA ATGATAAAAA ATTGTTACCG GGTATGATCG CGGAAGTGAA TATTCCGATG
GACGCGGCTG ACAGTACCTT CCTGGTACCG AAAGCAGCGG TGGTGAATTC TACAGTAAAT
GTGTTCGTGG TAAGGGTAAC AAACGGCAAA GCGGAAAGAG TACAGGTACA AACCGGCCGC
GAAGCTGAAG GTAAAGTTGA AATCTATGGT AATCTCAACG AAGGCGACAC CATTCTGGCT
GCCGCTAACG AAGAAGTAAG AGATGGCGCT GAACTGAAGC ACGTTAAAAC AGGCAAGTAA
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| Protein sequence | MYHPYTNNMN SLKALAITIS LPATLLFSSC SHTEGKSENK ENAQEEAPVA AISLQKGKLA
SSLQLPGELI AYQQVDIYAK VSSFVKKLHV DVGTEVSQGQ LLATMEAPEI SSQLAGAESR
IKSQEAVYLA SKANYDRLYN TSLTPGTVSK NDLDIAQARM KSDLAQWDAG KAAYREISDN
RNYLEIRAPF SGVISARNVS AGAYVGPTGK GSELPLFTLQ EQKKLRLVIS VPESYTAYLN
SSSEVKFNVK AFTGQQFTAK VNRLSGALDA RLRSQRIEMD VINNDKKLLP GMIAEVNIPM
DAADSTFLVP KAAVVNSTVN VFVVRVTNGK AERVQVQTGR EAEGKVEIYG NLNEGDTILA
AANEEVRDGA ELKHVKTGK
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