Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2578 |
Symbol | |
ID | 8358738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3154792 |
End bp | 3155298 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644964761 |
Product | hypothetical protein |
Protein accession | YP_003122262 |
Protein GI | 256421609 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.604019 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.277683 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTAAGT ATACCGCAAC CATATTGAAA TTTGAGCAGC AGGGAGAGAA GTCAGGATGG ACATATGTTT CCGTGCCGGA AGATATCGCA CAGGAAATAA AGCCCGGTAA CAGGAAGATA TTCCGGGTAA AAGGAAAGCT GGATAAATAC GCCATAGCTG CAATCGCACT GATGCCTATG GGAGATGGTT CCTTTATACT ACCCCTGAAC GCTGAAATGC GCAAAGGCAT CGCCAAAAAG GTGGGGGCTA AAGTTGAAAT ACAGCTGAAA GAAGACGATA ACCCCGATCC TGTTACATCC CCTGAATTCA CGGAATGCCT CCAGGACGAT CCGGAAGCCC TGGCTTTTTT CAACACATTG ACCAAAGGTC ACCAGAACTA TTTTCTGAAA TGGATCGAGT CAGCCAAAAC TGAACCGACC AAAGCAAAAC GCATTGCACA GTCCCTTACC GGACTGGCCC GTAAACAGGA TTATCCGGCA ATGATCCGAT CAAACAAAGG AAAATAG
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Protein sequence | MVKYTATILK FEQQGEKSGW TYVSVPEDIA QEIKPGNRKI FRVKGKLDKY AIAAIALMPM GDGSFILPLN AEMRKGIAKK VGAKVEIQLK EDDNPDPVTS PEFTECLQDD PEALAFFNTL TKGHQNYFLK WIESAKTEPT KAKRIAQSLT GLARKQDYPA MIRSNKGK
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