Gene Cpin_2578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2578 
Symbol 
ID8358738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3154792 
End bp3155298 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content47% 
IMG OID644964761 
Producthypothetical protein 
Protein accessionYP_003122262 
Protein GI256421609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.604019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.277683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAAGT ATACCGCAAC CATATTGAAA TTTGAGCAGC AGGGAGAGAA GTCAGGATGG 
ACATATGTTT CCGTGCCGGA AGATATCGCA CAGGAAATAA AGCCCGGTAA CAGGAAGATA
TTCCGGGTAA AAGGAAAGCT GGATAAATAC GCCATAGCTG CAATCGCACT GATGCCTATG
GGAGATGGTT CCTTTATACT ACCCCTGAAC GCTGAAATGC GCAAAGGCAT CGCCAAAAAG
GTGGGGGCTA AAGTTGAAAT ACAGCTGAAA GAAGACGATA ACCCCGATCC TGTTACATCC
CCTGAATTCA CGGAATGCCT CCAGGACGAT CCGGAAGCCC TGGCTTTTTT CAACACATTG
ACCAAAGGTC ACCAGAACTA TTTTCTGAAA TGGATCGAGT CAGCCAAAAC TGAACCGACC
AAAGCAAAAC GCATTGCACA GTCCCTTACC GGACTGGCCC GTAAACAGGA TTATCCGGCA
ATGATCCGAT CAAACAAAGG AAAATAG
 
Protein sequence
MVKYTATILK FEQQGEKSGW TYVSVPEDIA QEIKPGNRKI FRVKGKLDKY AIAAIALMPM 
GDGSFILPLN AEMRKGIAKK VGAKVEIQLK EDDNPDPVTS PEFTECLQDD PEALAFFNTL
TKGHQNYFLK WIESAKTEPT KAKRIAQSLT GLARKQDYPA MIRSNKGK