Gene Cpin_2577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2577 
Symbol 
ID8358737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3154219 
End bp3154728 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content45% 
IMG OID644964760 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003122261 
Protein GI256421608 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.230542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.273623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTATCT GCGAAACAGC ACGCCTGCAA CTCCGTCGAT TTACCATTGA TGACGCACCC 
TTTATATACC ATTTACTGAA CTCTCCTACC TGGCTGATTT ATATCGGGGA CAGGAATGTC
AGGGGCATCC ATGACGCCCG CAATTATCTG ATCAATGGAC CATTAGCCAG CTATGACCAG
TATGGTTTCG GATTATACCT GGTGGCGCTG AAAGAGGAAA AAACACCTAT CGGGATGACA
GGGTTGATAA AAAGAGATGG ATTGGAAGAG GTGGATATCG GGTTTGCATT TCTACCTGCT
TACACTGGTA AAGGGTATGC TTATGAGGCA GCCAATGCAA TAAAAGACTA TGCCCTTACT
ACATTAAAAC TGCCCCGGGT TGCTGCTATT ACAACGGAAA AAAATGACCA TGCCATTGCG
CTGCTGAATA AGATCGGCCT GCACCATGAG AAAATGGTAC AATTGCCGGG CAGCAGTATG
GAATTCATGT ATTTTTCAAC TAATGGCTAG
 
Protein sequence
MLICETARLQ LRRFTIDDAP FIYHLLNSPT WLIYIGDRNV RGIHDARNYL INGPLASYDQ 
YGFGLYLVAL KEEKTPIGMT GLIKRDGLEE VDIGFAFLPA YTGKGYAYEA ANAIKDYALT
TLKLPRVAAI TTEKNDHAIA LLNKIGLHHE KMVQLPGSSM EFMYFSTNG