| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2576 |
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| Symbol | |
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| ID | 8358736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3152090 |
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| End bp | 3154222 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644964759 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_003122260 |
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| Protein GI | 256421607 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.677524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.165671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGA CTGTAGTATA TCCTGGAAGT CCCTATCCGT TAGGGGCCAC CTGGGACGGA
AAAGGAGTAA ATTTTGCCCT CTATGCAGAT AATGCAACCG GTGTTGAACT CTGCCTCTTT
AATACAACCG CTGACGAGGC AGAAGCCGTT AAGATAAAAA TCAAGGAACG TTCTCACCAG
GTATGGCACT GTTACATACC TGACATAAAA CCCGGCCAGC TGTACGGTTA CCGCGTACAT
GGTCCTTATG AACCACAAAA CGGTCATCGC TTCAACGCAA AGAAATTATT GATAGATCCA
TACGCCAAAG CAATCGCAGG CACCATCGAC TGGAGTGATG CCCTGTTTGG ATATAAAATG
GGTGATCCTG AAGAGGATCT CAGCTTCAGC GATGTAGATA GCGTACCCTT TATTCCAAAA
AGTGTAGTGA TTGATCAGTC TTTTGACTGG GAAGGCGACC GTGCTCCCAA GATCGCATAT
AATGAGTCCA TTATCTACGA GGCACATGTC AAAGGCTTTA CAAAGCTGCA TCCCGATGTT
CCGGAAGATA TCCGGGGGAC TTATGCCGGT ATGGCCCATC CGGTGACTGT TAATTACCTG
AAGGAACTGG GTATTACGGC TATCGAATTA ATGCCTGTTC ATCACTTTGT AGCGGACAGA
CACCTGGTAG ACCGAGGACT GACGAACTAC TGGGGCTATA ATACCATAGG CTTTTTTGCA
CCGGATGCCC GCTATGCAGC GGGCGGCGTA TTGGGAGAAC AGGTCACCGA ATTCAAGCAA
TTGGTTAAAA CGCTGCACCA GGCAGGTATC GAAGTGATCC TGGATGTGGT GTACAATCAT
ACAGGTGAAG GAAACCAAAT GGGGCCGACT TTGTCTTTCC GGGGAATAGA CAACGCGTCT
TACTATCGCC TGACGGAAGA CAAACGCTAC TACATGGACT ATACCGGTAC CGGGAATACC
TTGAACGCGT ACCTGCCCAA CGTACTGCGC CTGATGATGG ACAGTCTGCG TTACTGGATC
CAGGAAATGC ACGTAGACGG CTTCCGCTTT GACCTGGCCT CCACATTAGC CCGTGAACTC
CATGAAGTAA ATACACTGAG CGCCTTCTTT GACATCGTCT ACCAGGATCC GGTAATCTCC
CAGGTGAAAT TGATCGCAGA ACCCTGGGAT ATTGGTGAAG GTGGCTACCA GGTAGGAAAA
TTTCCACCCG GCTGGGCAGA ATGGAATGGT AAATACCGTG ATTGCATCCG TGACTACTGG
AGAGGGGCCG ATAGTATGCT GGGCGAATTT GCCGAACGTT TTACCGGTAG CTCTGATCTG
TATAAGAATG ACTATCGTAG TCCTACGGCC AGTATCAACT TCGTAACAGC TCACGATGGT
TTTACCCTGC GGGATCTGGT ATCCTACAAC GACAAACATA ACGAGGCCAA TCTCGACGAC
AACCGGGATG GGGATGAGCA TAACCGTTCC TGGAATTGCG GCGCTGAAGG AGCTACGGAT
GATGAGGGGG TACTGGCATT GAGAAGCCGC CAGCAACGTA ATTTCTTTGC AACACTCCTC
TTGTCACAAG GGGTACCGAT GATAGTCGCA GGGGATGAAC TGGGCCGTAC GCAAAAAGGG
AACAACAACT GCTATTGCCA GGATAATGAG TTATCGTGGG TGAATTGGCA GCAGATCGAT
AATGGGCTCC TGCAGTTCAC CCGGCAACTG ATAGCACTGA GGAGGGCACA CCCTGCCTTC
TGTCGCAGAC GCTGGTTCCA GGGACAACCA ATCAAAGGAA TAGGGCTGGA AGATATTGCC
TGGTTCCTGC CGGATGGCTC GGAAATGTCA GATGAACACT GGAGTCACGA CTTTGCAAAG
TCGATGGCTG TCTTTTTTAA CGGTAAAGGA CTACATAATA GCGGACCAAA GGGAGAGCAG
ATCGTGGATG ATAGCTTTTA TATCATTTTC AATGCACATT ATGAACCGCT GGACTTCACC
CTGCCGCTGG AAAAGTATGG TCATACCTGG ACAAAGGTCC TCGATACCCG TGATCTTCAG
ATCACGGAAC GGGAAGAAGT ATTAAAAGCA GAAGAGACGA TTAATGTGGA TGCCCGCTCT
GTTATGGTGC TTCGCCATAA ACTGATGCAC TAG
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| Protein sequence | MNQTVVYPGS PYPLGATWDG KGVNFALYAD NATGVELCLF NTTADEAEAV KIKIKERSHQ
VWHCYIPDIK PGQLYGYRVH GPYEPQNGHR FNAKKLLIDP YAKAIAGTID WSDALFGYKM
GDPEEDLSFS DVDSVPFIPK SVVIDQSFDW EGDRAPKIAY NESIIYEAHV KGFTKLHPDV
PEDIRGTYAG MAHPVTVNYL KELGITAIEL MPVHHFVADR HLVDRGLTNY WGYNTIGFFA
PDARYAAGGV LGEQVTEFKQ LVKTLHQAGI EVILDVVYNH TGEGNQMGPT LSFRGIDNAS
YYRLTEDKRY YMDYTGTGNT LNAYLPNVLR LMMDSLRYWI QEMHVDGFRF DLASTLAREL
HEVNTLSAFF DIVYQDPVIS QVKLIAEPWD IGEGGYQVGK FPPGWAEWNG KYRDCIRDYW
RGADSMLGEF AERFTGSSDL YKNDYRSPTA SINFVTAHDG FTLRDLVSYN DKHNEANLDD
NRDGDEHNRS WNCGAEGATD DEGVLALRSR QQRNFFATLL LSQGVPMIVA GDELGRTQKG
NNNCYCQDNE LSWVNWQQID NGLLQFTRQL IALRRAHPAF CRRRWFQGQP IKGIGLEDIA
WFLPDGSEMS DEHWSHDFAK SMAVFFNGKG LHNSGPKGEQ IVDDSFYIIF NAHYEPLDFT
LPLEKYGHTW TKVLDTRDLQ ITEREEVLKA EETINVDARS VMVLRHKLMH
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