| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2574 |
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| Symbol | |
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| ID | 8358734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3148157 |
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| End bp | 3149989 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644964757 |
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| Product | malto-oligosyltrehalose trehalohydrolase |
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| Protein accession | YP_003122258 |
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| Protein GI | 256421605 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0923119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.935867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCAAATA TTTATCCTTT TGCAGGGGCT GCTTTGCAGT CGGACAATAC ATGTAAGTTC
AGTGTATGGG CTCCATTTCG TCAACAGGTC GCATTATCGG TGATACAGCC GGAGCCACAG
ATTTATCCTA TGCAACGGGA TGATAAAGGC TACTGGCATA CGACGATAGA AGGTTTATCC
GCAGGTGTAC GATATAAATA TATCCTGGAT GAGGCCACTA CCTTACCGGA CCCGGCCTCC
CGTTACCAGC CGGAAGGCGT ACACGGGCCA TCTGAAGTCA TTAACCCGGA TTTTGAATGG
ACTGATAACA GCTGGGCAGG ACTTGAGTTG CGTGATCTGA TTATTTATGA GTTACATACC
GGTACCTTTT CTCAGACACA CGATTTCCAG GGCATCATTG ACAAACTGGG CTATCTCCGG
TCATTGGGGA TTACTGCTAT AGAACTGATG CCGGTAGGAC AATTTCCCGG TGATCGCAAC
TGGGGATATG ATGGCGTTTA TCCTTTTGCT GTACAAAATT CCTATGGAGG TGTAAACGGA
TTAAAGGCAC TGGTGAATGC CGCCCACCAA CATGGTATAG CGGTGATCCT GGATGTAGTG
TATAATCACC TGGGACCGGA GGGGAATTAT TTTGCGCAAT ATGGACCATG GTTTACCGAC
AAGTATAAAA CGCCCTGGGG TCCTGCGCTC AATTTTGATG ATGCCTGGTG TGATGCGGTC
AGAGCTTATT ATATTCAGAA TGCGTTGATG TGGTTGGATG AATTCCATAT CGACGGACTA
AGAATGGATG CGGTGCATGC GATATGGGAT TGTGGTGCGC ATCACTTTAC AGCGGAATTG
TCTGCATTAG TAGATGCGCT ACAAGCATCA TCGGGAAAGA AGAAATTTCT GATTGCGGAG
ATTGATCTGA ATAGTCCAAA GTACATTACA CCAAGGGAAA AAGGTGGTTA TGGGATGCAT
GGGCAGTGGA TAGATGAATT TCATCATGCG TTGCATAGTC TGCTGACAGG TGAAGTGAAT
GGCTATTATG CGGATTTCGG CGGACTGGGG CCTATGGCAA AGTCTTACCA GGATTCATAT
GTATTTACCG GGGAATATTC CGGTGTGCGG AAAAGACATT TTGGTGTGGC GCCTTTAAGG
AATGATTACC ATCAGTTTGT TGTGTTTGCG CAAAACCATG ATCAGATCGG CAACAGGATG
TTAGGAGACA GGCTGACGAC GCAATTGTCA TTTGAGGCGC AGAAACTGGC AGCAGCGGTA
GTGTTGTTAT CGCCGCATAT TCCGCTATTG TTCATGGGAG AAGAATATGG CGAGACCAGG
CCTTTTCAGT TCTTTACCAG TCATAGTGAC AAAGACCTTA TTGCGGCTGT TACGAATGGA
CGCAGAGAGG AATTTGCCTC TTTTGCCTGG GAAGGAGAAG TACCCGATCC ACAATCTGTT
GAAACATTTA ATAACTCCAC GCTTAGCTGG CATACCAGAA CCGATAATGC GGCAGCTTTG
ATGGAACTAT ACCGGTTTCT GATCGCATTC CGCAGAACGA GACAAGCGAT GCTGAATACA
TCAAGAGAGG GGGTAAAAGT CCAGATCCCA CAAGTGGAGG AACAATTGCT GCTAGTGGAA
CGATCAGGTA ATGATGACCA TCTGTTGTTG CTGTTTAATT TTAGTGATCA TGCAGTGACT
TATCAATATA CAGGATCAGG AGAACTGTTG AAAAAGTTTG ACTCCGCCGC TGCCATCTGG
CATGGACCAG GCAGTACAAC ACCTGACCAG GCGACCACTT CTGAAGCTAT CTCAATACAA
CCATTCTCAG CTATCGTTTA TGAAATCATA TAA
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| Protein sequence | MANIYPFAGA ALQSDNTCKF SVWAPFRQQV ALSVIQPEPQ IYPMQRDDKG YWHTTIEGLS
AGVRYKYILD EATTLPDPAS RYQPEGVHGP SEVINPDFEW TDNSWAGLEL RDLIIYELHT
GTFSQTHDFQ GIIDKLGYLR SLGITAIELM PVGQFPGDRN WGYDGVYPFA VQNSYGGVNG
LKALVNAAHQ HGIAVILDVV YNHLGPEGNY FAQYGPWFTD KYKTPWGPAL NFDDAWCDAV
RAYYIQNALM WLDEFHIDGL RMDAVHAIWD CGAHHFTAEL SALVDALQAS SGKKKFLIAE
IDLNSPKYIT PREKGGYGMH GQWIDEFHHA LHSLLTGEVN GYYADFGGLG PMAKSYQDSY
VFTGEYSGVR KRHFGVAPLR NDYHQFVVFA QNHDQIGNRM LGDRLTTQLS FEAQKLAAAV
VLLSPHIPLL FMGEEYGETR PFQFFTSHSD KDLIAAVTNG RREEFASFAW EGEVPDPQSV
ETFNNSTLSW HTRTDNAAAL MELYRFLIAF RRTRQAMLNT SREGVKVQIP QVEEQLLLVE
RSGNDDHLLL LFNFSDHAVT YQYTGSGELL KKFDSAAAIW HGPGSTTPDQ ATTSEAISIQ
PFSAIVYEII
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