Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2549 |
Symbol | |
ID | 8358708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3119022 |
End bp | 3120044 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644964732 |
Product | ABC transporter related |
Protein accession | YP_003122234 |
Protein GI | 256421581 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTACAGA TGAACGATCC TATCATACAA CTGAAAGGGT TGACAAAATG CTATGGGAAG AAAAAAGCAG TGGATGGTCT TGACCTCGCA ATCCGCAGAG GAGAAATATT CGGTTTATTA GGACCTAACG GTGCCGGTAA AACCACCACC ATCCTTATGA TGCTAGGCCT CACAGAGCCC ACAGAAGGCA CCGCGTACGT GTGCGGATTT AATGCTACCC GAGAGCCAAT TGCCGTAAAG CGTACCGTAG GTTACATGCC GGACAGTGTA GGATTCTACG ATAGCATGAC CGCCCTGGAG AATCTGCTTT ACATTGGCCG TTTAAATGGT CTTCCGGAGC ACGAAGTAAA GACAAGAGCC ACAGAAACGC TGGCATTGGT AGGCCTTGCA GGTGACATGA ATAGAAGTAC ATATACCTTT TCCCGGGGAA TGAAGCAGCG CCTGGGGCTA GCAGACGTAC TAATCAAAAA ACCAGCCGTC ATTATCCTCG ATGAGCCGAC GCTCGGCATT GATCCCGCTG GGGTGAGGGA ATTTCTCACA CTAATCAGAC AACTCAGCAG GCAACACGGA ATCACCGTAT TGATCTCCTC CCATCACCTG CACCATGTAC AGCAGGTATG TGACAGGGTA GGCATTTTCG TAAATGGCAA ACTGGAAGTG GAAGGCAACA TTGATACCCT TTCCGGAAAC TTACTGGACC GCGAAGGATA CTCTACCACC GTCACACTTG TCAGGCCCAT TATACAACCA TGGCCGCTTA TGCCAATCTT TTCAGAACTG GATGCCGTGA AAGAAGTGTC AGTGCAGAAC AACTGCCTTA CCTTCTTCTG CACCCGCGAT ATCACACCTT CCATTGTACG CCTGCTGGTG GACAATGGAT GCGACATAAC CGGCGTACAT CAAAAAGATT ACGGCCTGGA TGATATCTAT CAAAAGTATT TTGAAAACAA TGCAGCTGAA AATACAACTC ATGAAAAGTC TGCCAGTTTC CTTCAAAGGA CTTTCCTTAA AGAACAACCG TAG
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Protein sequence | MLQMNDPIIQ LKGLTKCYGK KKAVDGLDLA IRRGEIFGLL GPNGAGKTTT ILMMLGLTEP TEGTAYVCGF NATREPIAVK RTVGYMPDSV GFYDSMTALE NLLYIGRLNG LPEHEVKTRA TETLALVGLA GDMNRSTYTF SRGMKQRLGL ADVLIKKPAV IILDEPTLGI DPAGVREFLT LIRQLSRQHG ITVLISSHHL HHVQQVCDRV GIFVNGKLEV EGNIDTLSGN LLDREGYSTT VTLVRPIIQP WPLMPIFSEL DAVKEVSVQN NCLTFFCTRD ITPSIVRLLV DNGCDITGVH QKDYGLDDIY QKYFENNAAE NTTHEKSASF LQRTFLKEQP
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