Gene Cpin_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2548 
Symbol 
ID8358707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3118043 
End bp3118975 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content49% 
IMG OID644964731 
Producthypothetical protein 
Protein accessionYP_003122233 
Protein GI256421580 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGTA AAGAGATTGC AGACCATATA CGTAGTTGGC GCCTCATCGT TATGATGTCA 
CTCGTCTTAC TCACTTTCGT GGTTGCCATG TACGTATCGC TCTCCGGCAT CAGGAATGCT
ACCGGCAATC TGAGCGATCC TGATCACACT TTTCTCTACT TAAAACTGCT CACGGTTACC
GACAAAGTAG TGCCGCCCTT CCATGTATTT GTAAGTTTCC TGGGGCCACT GCTTGGCATC
AGCCTTGGTT TTGATGCCAT CAATGCAGAG CAGAGCAATG GAACGCTGGC CAGGATCATG
GCACAGCCGG TATACCGGGA CAACCTTTTG CTTTCCAAGT TTGTGAGCGC GGGTATGGTC
GTGACAGTTT TCTTCACTTC CCTGGTATTG CTCATGGTAG GTGGTGGTCT GCTCTTTACC
GGCGTACGTA TAGAACCACA GGAGGTATTA AGAATCTTCA CTTTTACCTT CTTCAGCATT
ATATATGTTG CTTTTTGGCT GTCGCTTTCC ATCCTGCTGT CTGTGCGCCT CAAACAAGGT
GCTGCAGCAG CATTAGCCGC TATTGGAATA TGGATCTTCC TTACCGTATT TTACCAACTC
CTGGTAAAAC TACTGATAAG GGCCATACTC CCCGCAGATC CGGGTATGTT GTCGCAGGAG
CAGATCATAG GATATAACAA TATGATTCTT GATCTGTTAC GGATAGCCCC CAGCCAGCTA
TATACAGATG CCACTACCAC CTTACTCATG CCATCCGTAC GCAGCCTGGG TCCGGTAACT
ATGGAGGACA TGGCAGGTGC TGTGCCGGCG CCGCTACCCT TTAAAGAAAG CCTTATGATC
GTATGGCCGC AGGTAAGCGG ATTGCTCGCA GCTACTACCG TTTGCTTTGC ATGGTGCTAT
TACCTGTTCA TGAGGAGAGA GATCAGGAGC TAA
 
Protein sequence
MVRKEIADHI RSWRLIVMMS LVLLTFVVAM YVSLSGIRNA TGNLSDPDHT FLYLKLLTVT 
DKVVPPFHVF VSFLGPLLGI SLGFDAINAE QSNGTLARIM AQPVYRDNLL LSKFVSAGMV
VTVFFTSLVL LMVGGGLLFT GVRIEPQEVL RIFTFTFFSI IYVAFWLSLS ILLSVRLKQG
AAAALAAIGI WIFLTVFYQL LVKLLIRAIL PADPGMLSQE QIIGYNNMIL DLLRIAPSQL
YTDATTTLLM PSVRSLGPVT MEDMAGAVPA PLPFKESLMI VWPQVSGLLA ATTVCFAWCY
YLFMRREIRS