| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2546 |
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| Symbol | |
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| ID | 8358705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3116555 |
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| End bp | 3117379 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644964729 |
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| Product | Integrase catalytic region |
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| Protein accession | YP_003122231 |
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| Protein GI | 256421578 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTAAAG TGTTTAAAGT AAGCCGCAGT GGCTATTATG CCTGGTTAAT TAGAAAACCT
TCAAAACAGG CGATTGAGAA TCACGCTCTA AGCGATAGAA TTGAAGCAAT ATACCGTTCT
GGCAAAGGCC GGTATGGAAG TCCTAAAGTA ACCAGGGTAT TCAAATCAGA TGGAATACAT
GTATCACAAC GGAGAGTAGC CCGGATCATG AGGTCAAAAG GGCTCCGTAG TGTAATTGTA
GGTAAGTTTA AAGTCTGTAC TACGGATTCT AATCATGACA AAGAGGTATC TTCTAACATA
TTAAACAGAG AATTCACTGC AACGTCACCA TCAGAAAAAT GGGTCTCAGA CATTACATAT
ATCCGTACAA AATCCGGGTG GCTCTATCTC ACTGTCATTA TGGATCTGTT TGACAGGAAG
ATACTGGGAT GGGCGATGAG TAAAGGGATG ACAGCAGCAG AAACAGTAGT AGCAGCGTGG
AAAATGGCTA TCAGGAACAG GTCTGTAAAA GAGCATATGA TCATCCATTC AGACAGAGGC
GTACAATATG CCAGTCATGA ATTTCGGATA TTGCTCAAAT CAGGTCAAAT AAGGCAAAGC
ATGAGCCGTA AAGGAAATTG CTGGGATAAT AGTGTATGTG AAAACTTTTT CAAAATTCTC
AAGTCAGAAA CAGGGTTTAA CAGCATTTAC GATTCCTTTG AGGTTGCCAG AAGAGAAATA
TTTGAGTTCA TAGAAATCTG GTATAATCGA AGGAGAATAC ACTCCCGACT GGGATATATG
ACACCTGAAC AATTTGGAAA TTCTTTAATC AAACAAGCGG CTTAA
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| Protein sequence | MCKVFKVSRS GYYAWLIRKP SKQAIENHAL SDRIEAIYRS GKGRYGSPKV TRVFKSDGIH
VSQRRVARIM RSKGLRSVIV GKFKVCTTDS NHDKEVSSNI LNREFTATSP SEKWVSDITY
IRTKSGWLYL TVIMDLFDRK ILGWAMSKGM TAAETVVAAW KMAIRNRSVK EHMIIHSDRG
VQYASHEFRI LLKSGQIRQS MSRKGNCWDN SVCENFFKIL KSETGFNSIY DSFEVARREI
FEFIEIWYNR RRIHSRLGYM TPEQFGNSLI KQAA
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