Gene Cpin_2532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2532 
Symbol 
ID8358691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3106171 
End bp3108483 
Gene Length2313 bp 
Protein Length770 aa 
Translation table11 
GC content46% 
IMG OID644964715 
Producthypothetical protein 
Protein accessionYP_003122217 
Protein GI256421564 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTT CCAGTGTGCC TGTACTTATA TTATACCTGT TGTTCACCCT ATCTCCCCAG 
CGTGTCACCG CACAAACGTT ATACAAACCT TTACTGCTCA AAAACGTACA GCACCTGCCA
TTGCCGGATA CCTCTCACGT CGTGTTTGTC CTGCTCGCGT TCAATGATGC TGCAGAAAAT
ATCGCCGTCG CCAACCTTGA TGTTGAGATG CCTGTGAAAT TGAATGTGAT CGCAGCTGCT
CCACTCGGCA AGGGTAAGCT CATTGCCTTT GGCAGTGGCG CCTATTTACA TAAAGATCTG
CTTCATGACG CCAACGTACA GCAACTGGTG CAAAACATGT TCATATGGGC GGGTAATGGT
CGTAAACGCC CCAAAATGGG CCTTTATACA AGTGCAGACA GCTCCTTCCT GCAACTGGCA
TCTCAGCGTC ATATAAGTAC CTACCCCATA AGCAACGCAG GTATAGAAAA AAATACTGAT
ATTATCTACC TGGAAACAGA TGTAACTGAT AAAGATACAC TCAAAACCCT GGAAACCTTT
GTACGTAATG GAGGCACGCT CATACAGGTG TCTCCTTATG AGCAAATATA TTATAAAATG
CTTGCTGCTC CCGGTACCAT ACAGAATGCC GGTATCAATA CGCTGTTGGC AAAAGCCGGT
CTCTATGATA TAAACATGGC CTTTTATAGT ACTTATCAAA ATAAGGAACT GATCTTAGAT
AGTGTACCTG ACTATCTCCA TCTGTCCAGT ATGCTCCCTT TGCTGAAACG CCCGTCTACC
GGCATCGTTG ATGATATTAC CGATAAGTAT ATCGTGCAGC CTACTGTGGA CCTGTTGTTC
GAAAATAACG ATATTAACGC CGCTGTTCTG CAGACCCTTA AAGCGCAATA TAAGGTGCCG
GATACCCTGA CAATTCCCAC ACCGCAAAAT CCGCTAATAT TGTCAAATAC GGAAGAAAAG
GTACGTTATC ATCTTACCCG CCGTTTTTTC GGGAAGACGC GTTCTCTTAT CGACGATAAA
CATGCAGTAT CTCCAGGCGC CCGTTACTTT CCCGGCCTTG TACCGGATAC CGCTACCCGC
ATTACCACCA GTATCACGGT ACCGGTGCAG GTAGGGACAC AAGGTTTGCT GGAACCTACC
GCCATCTACT TCAGACCACA TCCTACAGGA CTGTATGTAC CGCCTGGCAC GGAAGTGAAG
GTTATACTGC AAAGTAAAGA CAAAACACAG CATCTGAAAG CACAGATAGG GGTACACAAT
GATGACCTGG CGGACCTCAC CCAACTGACC CGTAGTGCCG AAAATATGGT ACGCACCTTC
TCACTGGACA ATGACACTAC ACTTATCTAC TCCCCTTTTG GAGGACTACT GCAGCTCAAT
GTTAGTGATA CCACTACACT CAAAGAGATC ACCATTACCG TAACAGGTGT TGTCAAGGCG
CCCTACTTTA AACTGGGTCA GACCAGTGAA GCCTCCTGGA TAAATAGCAT TCGTAACAAC
CCGGCTCCCT GGGCTGAACT GGCCACAGAT AAAATCATCC TTACTGTACC TGCTTACCGC
ATCCGCCAAT TGGATAATCC GGTGAAACTT ATGCAGTTCT GGAACGAAGT AATGGATGCA
GATGCCGATC TGGCCAGGAT ATCCCGTATC CGTTCCCATC CCGAAAGAGT AGTCGTAGAC
CAGGATGTCG CATATGGTTA CATGTACACA GCGCCAGAGC GCATCATCGT GCCGGATGAT
CAAAGTTGTG CATTGATGCT GGATGAATCC CAGGTTCGCG CTAACGGCTC CTGGGGACTG
TTCCACGAAT TAGGACACCG TCATCAGTTC TGGGGCATTG ACTTTGGCGA ATTACAGGAA
GTTACGGTAA ACCTGTTCAC CATGCATGTT TATAATAAAG TACTGCACAA AGGCATCTAC
AATCACGAAG AAATTGCCAG TAAAGAAATT GTATTGAAAA AGATCAACAA CTACCTGCAA
AACAACCCAT CCTTTGAAAA GTGGGGTCAG GATCCCTTTC TGGCGCTTTG CATGTACATA
GAGCTCATAC AGCAGTTTGG CTGGCAAAGT ATAGAGGATA CTTTTACAAA ATACAGGGCT
ATGCCGAAGG AACAATACCC TCAATCGCAG GAAGACAAGC GAAACCTTTG GTTCCTGACT
ATTTGCGATG TAACCAAAAC CAATCTTACA CAATTCTTCG ATATCTGGAA AGTACCTGTG
TCAGATCATG TGAAGGAAAA AGTAAGCACC TATCCTTCCT GGCTGCCTGA TGAACTGAAG
CACTATGATA CGCAGAAAGC GCCTGTCCAT TAA
 
Protein sequence
MKLSSVPVLI LYLLFTLSPQ RVTAQTLYKP LLLKNVQHLP LPDTSHVVFV LLAFNDAAEN 
IAVANLDVEM PVKLNVIAAA PLGKGKLIAF GSGAYLHKDL LHDANVQQLV QNMFIWAGNG
RKRPKMGLYT SADSSFLQLA SQRHISTYPI SNAGIEKNTD IIYLETDVTD KDTLKTLETF
VRNGGTLIQV SPYEQIYYKM LAAPGTIQNA GINTLLAKAG LYDINMAFYS TYQNKELILD
SVPDYLHLSS MLPLLKRPST GIVDDITDKY IVQPTVDLLF ENNDINAAVL QTLKAQYKVP
DTLTIPTPQN PLILSNTEEK VRYHLTRRFF GKTRSLIDDK HAVSPGARYF PGLVPDTATR
ITTSITVPVQ VGTQGLLEPT AIYFRPHPTG LYVPPGTEVK VILQSKDKTQ HLKAQIGVHN
DDLADLTQLT RSAENMVRTF SLDNDTTLIY SPFGGLLQLN VSDTTTLKEI TITVTGVVKA
PYFKLGQTSE ASWINSIRNN PAPWAELATD KIILTVPAYR IRQLDNPVKL MQFWNEVMDA
DADLARISRI RSHPERVVVD QDVAYGYMYT APERIIVPDD QSCALMLDES QVRANGSWGL
FHELGHRHQF WGIDFGELQE VTVNLFTMHV YNKVLHKGIY NHEEIASKEI VLKKINNYLQ
NNPSFEKWGQ DPFLALCMYI ELIQQFGWQS IEDTFTKYRA MPKEQYPQSQ EDKRNLWFLT
ICDVTKTNLT QFFDIWKVPV SDHVKEKVST YPSWLPDELK HYDTQKAPVH