Gene Cpin_2529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2529 
Symbol 
ID8358688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3104132 
End bp3105070 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content42% 
IMG OID644964712 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003122214 
Protein GI256421561 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.252181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTAAAT TTACAGATCA GCCGTTTATG AATAATATTC AAACGATATC AGCATTTCAC 
CGTTTATTAT CATTACCAGC TCCTACACAT CCGCTGGTGA GCGTGGCGCG TCTGCAGGAT
AGAAAATCCG CTAACGATGA TATCTGGCAA CCCTTTTCTG TTGATTTTTA TACGATATCC
CTGAAAAGGG AGGTCCGGGC CAGGATGAAG TATGGTCAGC AGTATTATGA TTTTGACACC
GGGATCATGA GTTTTACTTC ACCCAGACAG GCGCAATTAC TTGAAATGGT AGATGAAAGT
ACAGCTGGTC CTCAATTTGG GAAAGGGTTT GTACTCATGT TGCATCCGGA CTTTTTAAGA
CGACATCCCC TGGCGACGAC TATCAGAAAT TATGGTTTCT TCTCTTATGC CGTGAACGAA
TCACTGCATC TTTCTGCACA GGAGGAGCGG AACATTATAG ACGTTTTCAG AAAGATAGAA
CAGGAGGGAA AGCATATTGA CAAACATACA CAGCCGGTGA TGCTTTCACA GATAGACTTA
CTCTTGAATT ATTGTAATCG CTTTTATGAA CGGCAGTTCA TCACCCGTAA AGCGGTTAAC
AGTGATTTAC TAATGAAGCT TGAACAGCTC CTGGATAAAT GGTTTGAAAC GAATGATGAT
TTTAAGCGAT CACTTCCTAC GGTGGAATAT CTTGCAGGTA AATTAAACTT GTCTCCGCAT
TATCTGACAG ATATGTTACG CGCGTTGACT GGACAAAGTA CCCAGGCACA TATTCATGAG
AAGCTGATTG AAAAAGCGAA AGAAAGATTG TCAACGACTA CACTTTCCGT CAGTGAGATT
GCCTATGAAC TTGGTTTTGA GCATCCACAG TCTTTTAGTA AGTTGTTTAA GGCGAAGACA
GCATTGTCTC CTTCAGCATT CAGGGAGTCT TTTAGTTGA
 
Protein sequence
MLKFTDQPFM NNIQTISAFH RLLSLPAPTH PLVSVARLQD RKSANDDIWQ PFSVDFYTIS 
LKREVRARMK YGQQYYDFDT GIMSFTSPRQ AQLLEMVDES TAGPQFGKGF VLMLHPDFLR
RHPLATTIRN YGFFSYAVNE SLHLSAQEER NIIDVFRKIE QEGKHIDKHT QPVMLSQIDL
LLNYCNRFYE RQFITRKAVN SDLLMKLEQL LDKWFETNDD FKRSLPTVEY LAGKLNLSPH
YLTDMLRALT GQSTQAHIHE KLIEKAKERL STTTLSVSEI AYELGFEHPQ SFSKLFKAKT
ALSPSAFRES FS