Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2529 |
Symbol | |
ID | 8358688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3104132 |
End bp | 3105070 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644964712 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003122214 |
Protein GI | 256421561 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.252181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTTAAAT TTACAGATCA GCCGTTTATG AATAATATTC AAACGATATC AGCATTTCAC CGTTTATTAT CATTACCAGC TCCTACACAT CCGCTGGTGA GCGTGGCGCG TCTGCAGGAT AGAAAATCCG CTAACGATGA TATCTGGCAA CCCTTTTCTG TTGATTTTTA TACGATATCC CTGAAAAGGG AGGTCCGGGC CAGGATGAAG TATGGTCAGC AGTATTATGA TTTTGACACC GGGATCATGA GTTTTACTTC ACCCAGACAG GCGCAATTAC TTGAAATGGT AGATGAAAGT ACAGCTGGTC CTCAATTTGG GAAAGGGTTT GTACTCATGT TGCATCCGGA CTTTTTAAGA CGACATCCCC TGGCGACGAC TATCAGAAAT TATGGTTTCT TCTCTTATGC CGTGAACGAA TCACTGCATC TTTCTGCACA GGAGGAGCGG AACATTATAG ACGTTTTCAG AAAGATAGAA CAGGAGGGAA AGCATATTGA CAAACATACA CAGCCGGTGA TGCTTTCACA GATAGACTTA CTCTTGAATT ATTGTAATCG CTTTTATGAA CGGCAGTTCA TCACCCGTAA AGCGGTTAAC AGTGATTTAC TAATGAAGCT TGAACAGCTC CTGGATAAAT GGTTTGAAAC GAATGATGAT TTTAAGCGAT CACTTCCTAC GGTGGAATAT CTTGCAGGTA AATTAAACTT GTCTCCGCAT TATCTGACAG ATATGTTACG CGCGTTGACT GGACAAAGTA CCCAGGCACA TATTCATGAG AAGCTGATTG AAAAAGCGAA AGAAAGATTG TCAACGACTA CACTTTCCGT CAGTGAGATT GCCTATGAAC TTGGTTTTGA GCATCCACAG TCTTTTAGTA AGTTGTTTAA GGCGAAGACA GCATTGTCTC CTTCAGCATT CAGGGAGTCT TTTAGTTGA
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Protein sequence | MLKFTDQPFM NNIQTISAFH RLLSLPAPTH PLVSVARLQD RKSANDDIWQ PFSVDFYTIS LKREVRARMK YGQQYYDFDT GIMSFTSPRQ AQLLEMVDES TAGPQFGKGF VLMLHPDFLR RHPLATTIRN YGFFSYAVNE SLHLSAQEER NIIDVFRKIE QEGKHIDKHT QPVMLSQIDL LLNYCNRFYE RQFITRKAVN SDLLMKLEQL LDKWFETNDD FKRSLPTVEY LAGKLNLSPH YLTDMLRALT GQSTQAHIHE KLIEKAKERL STTTLSVSEI AYELGFEHPQ SFSKLFKAKT ALSPSAFRES FS
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