Gene Cpin_2528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2528 
Symbol 
ID8358687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3103167 
End bp3104084 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content48% 
IMG OID644964711 
Productdienelactone hydrolase domain protein 
Protein accessionYP_003122213 
Protein GI256421560 
COG category[R] General function prediction only 
COG ID[COG1073] Hydrolases of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0524869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAT CAGTAAAATT CTCAAACAGG GCCTGGGAAG TTGCGGCAGA TCTTTATCTG 
CCGGACAACC TTGATAAAAC CAAAAAGCAT ACAGCAATTA TTTGTGTTCA TCCGGGTAGC
AGCGTAAAAG AACAGACGGC AGGTCTCTAC GCGGCTAAAC TATCGAAGGA GGGATTTATA
GCAATCGCCT TTGATGCTTC TTTTCAGGGG GAAAGCGGCG GTATGCCCCG TTACCTGGAA
GATCCTGTGA CCCGTGTGGA AGACATCCGT TGTGCGGTGG ACTATCTGAC TACTGTAGAC
TTTGTAGGTA GTGAACGTAT CGGTGTACTA GGGATTTGTG CGGGTGGTGG TTACGCGGCA
AATGCAGCCC TTACGGAAAG ACGTATCAAA GCGGTTGTGT CTGTTTCTCC TACGAATATC
GGTCGCGCTT ACAGAGAAAA CAGTACAATA GCAACACTGG AAGCAGTCGG CCGACAACGT
ACGGCAGAAG CAAACGGAGC AGCTGCCTTG ATTACACCGT GGACGCCGGC GTCTGCAGCA
GCTGCAAGGC AGGCTGGGTT GACAGATGCG GATCTGCTGG AGGCAATAGA TTATTATAGA
ACCTCCAGGG GAGAACATCC GAATGCCAAC AATCAGCTGC GCTTTACCAG TATCAGTTCC
ATCATGGCAT TTGATGCTTT CCATCTGGCA GAATATTTAT TAACGCAGCC TTTACTGGTG
ATAGTGGGAG ATAGGGTCGG TTCATTCGGC GCTTACAGAG ATGGCTTTGA GCTGTATAAT
AAAGCTGCGT CAAAAGATAA AAGCATTCAT ACCGTAAAAG GAGCTGGCCA TTACGATCTT
TATGATCAAC CGGCAGCGAC AACGGAAGCA GTTGGGAAAA TTGTTCCCTT TCTGCAGAAA
GCTCTTTCGG CGGAATAG
 
Protein sequence
MQQSVKFSNR AWEVAADLYL PDNLDKTKKH TAIICVHPGS SVKEQTAGLY AAKLSKEGFI 
AIAFDASFQG ESGGMPRYLE DPVTRVEDIR CAVDYLTTVD FVGSERIGVL GICAGGGYAA
NAALTERRIK AVVSVSPTNI GRAYRENSTI ATLEAVGRQR TAEANGAAAL ITPWTPASAA
AARQAGLTDA DLLEAIDYYR TSRGEHPNAN NQLRFTSISS IMAFDAFHLA EYLLTQPLLV
IVGDRVGSFG AYRDGFELYN KAASKDKSIH TVKGAGHYDL YDQPAATTEA VGKIVPFLQK
ALSAE