| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2522 |
|---|
| Symbol | |
|---|
| ID | 8358681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 3098462 |
|---|
| End bp | 3099304 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644964705 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_003122207 |
|---|
| Protein GI | 256421554 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0795071 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG CAACCTCTAT GCAAAACACC ACAAATCCCA ACAAAGCACT ATGGGAAAAG
GGAGACTTTA CACGCCTTGC AGCAACCATG CGTGAAAGCG GCACCGAACT GATCTCAAAA
CTCGACATTA CACCAGGTAT GGACGTACTT GATCTTGGTT GTGGTGATGG CACTACTGCC
CTTCCGTCGG CCCGTCTTGG CGCCAGGGTA TTAGGAGTAG ATATTGCCCG AAACCTGGTA
GCCGCAGGGA ATAAGCGTAT CGAGGAAGAG GGTCTGACTA ATATTCGTAT CCTGGAAGGA
GATGCTACTC ATCTGGAAGG AATTGCGGAT GCCAGCTTTG ACCTCGTTGT AAGCATTTTC
GGTGCCATGT TTGCCCCGAA ACCATTTGAT GTGGCAAAAG AGATGGTAAG GGTAACACGA
CCCGGTGGAA GGATTGTAAT GGGCAACTGG ATACCTGGCG ACCCAACCCT GGTAGCACAG
ATATTGAAGG TCAGTGCTGC TTATACGCCT CCTCCACCGG AAGGCTTTAT CAGTCCCGTT
TTATGGGGAA TAGAAGACAA CGTAAAAGAA CGGTTTGGTC AGGCGGGTAT TTCTGCGGAT
AACATCTCCT TTATCAGGGA TACCTACACC TTCCAGGCGC CATTCCCTGC CGCCTCATTT
GTAGAACAAT TCAGGCTGTA TTATGGTCCC ACAATGAACG CTTTCGATGC TGCAGAAAAA
AATGGTAAGG CAACAGAGCT GCAAAAGGAA CTGGAAGAAT TATTCGTTCG GGAGAACAGG
AGTAAAGATC CGGATAAGAC CTCTATTCCG GCAACATTCT TACGTGTGAC CGTTCAACGC
TGA
|
|---|
| Protein sequence | MSDATSMQNT TNPNKALWEK GDFTRLAATM RESGTELISK LDITPGMDVL DLGCGDGTTA
LPSARLGARV LGVDIARNLV AAGNKRIEEE GLTNIRILEG DATHLEGIAD ASFDLVVSIF
GAMFAPKPFD VAKEMVRVTR PGGRIVMGNW IPGDPTLVAQ ILKVSAAYTP PPPEGFISPV
LWGIEDNVKE RFGQAGISAD NISFIRDTYT FQAPFPAASF VEQFRLYYGP TMNAFDAAEK
NGKATELQKE LEELFVRENR SKDPDKTSIP ATFLRVTVQR
|
|---|
| |