| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2518 |
|---|
| Symbol | |
|---|
| ID | 8358677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 3095599 |
|---|
| End bp | 3096612 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644964701 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003122203 |
|---|
| Protein GI | 256421550 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACA GCATAAACTT CCTCCGCCGT CATTTCCTGG GTATAGCTTT AATATTTGCC
GCATTGAGTA TCGGCGGACT GAATACCGTC AACGCACAAA CTAAGGATGC CTCATTTGAT
CATGTGAAAC AGATCAAAGC GGGTGTGCTG GATGTGGGAT ATGTAGAAGC AGGGCCGGCT
GACGGAGAAC CGGTAATATT GCTTCATGGT TGGCCATATG ATATTTACAG TTATAAAGAA
GTATCTGATA TCCTGGCGGC CAAAGGATTC AGGGTATTGA TACCTTATCT GCGTGGTTAT
GGTACGACCC GGTTTTTGTC GGCAGCTACA CCACGTAACG GACAACAATC AGTGGTGGCC
GTAGACATCA TCGAATTTAT GGACGCACTG AAAATTAAAA AAGCAGTAGT CGGTGGTTTT
GACTGGGGCG CACGTACTGC TGATATTATG GCCGCCCTCT GGCCTGAACG TGTAAAAGGA
CTGGTATCGG TAAGTGGTTA CCTGATCGGT AGTCAGGCGG CTAATAAAAC ACCTTTACCT
CCTAAAGCAG AATTGTCCTG GTGGTATCAG TTTTATTTCG CGACAGAACG TGGTCGTGCA
GGATATGAGG CAAACACCCA TGACTTTAAT AAGCTGATCT GGCAGACTGC CTCCCCAAAA
TGGAATTTCA GCGATGCAGT GTACAACCAG TCAGCAACTG CATTTGATAA TCCGGATCAT
GTGAAGATCG TTATCGATAA CTATCGCTGG AGACTTGGTC TGGCTGAAGG AGAAGCAAAG
TATGATGATC TGGAAAAGAA ACTGGCTGCA TCACCTGATA TTACAGTACC TACCGTTACA
TTGGAAGGCG ATGCCAATGG TGCGCCACAT CCCGATCCTG CAAAATATGC TGCTAAGTTT
AAAGGCAAAT ATGCACATCA TACACTTACC GGCGGTGTAG GACACAACCT TCCGCAGGAA
GCACCGCAGG CATTTGCAGA TGCAATTATT GAAGTGAATA ATTTTACAAA ATAG
|
|---|
| Protein sequence | MNNSINFLRR HFLGIALIFA ALSIGGLNTV NAQTKDASFD HVKQIKAGVL DVGYVEAGPA
DGEPVILLHG WPYDIYSYKE VSDILAAKGF RVLIPYLRGY GTTRFLSAAT PRNGQQSVVA
VDIIEFMDAL KIKKAVVGGF DWGARTADIM AALWPERVKG LVSVSGYLIG SQAANKTPLP
PKAELSWWYQ FYFATERGRA GYEANTHDFN KLIWQTASPK WNFSDAVYNQ SATAFDNPDH
VKIVIDNYRW RLGLAEGEAK YDDLEKKLAA SPDITVPTVT LEGDANGAPH PDPAKYAAKF
KGKYAHHTLT GGVGHNLPQE APQAFADAII EVNNFTK
|
|---|
| |