| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2496 |
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| Symbol | |
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| ID | 8358654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3071278 |
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| End bp | 3073635 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644964682 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003122185 |
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| Protein GI | 256421532 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTAC CTCTAAACAA ATACCTGCTA TTTGTAGTAG CAATGCTATG CTTATTTCTT
AACGTAAACG CTGCTGATGC ACCGAAAGGT AGCATTAAAG GCAAGGTCAT TACCAGTGAT
GGCAATGCAG CGCCTTCGGT AACGGTTGTG CTGAAAGAGA CGAAGAAACA TGCCATCACC
AATGAGAATG GCGAATTTAT ATTACGTGAT GTGCCAGCCG GTACGTATGA ATTGGTTGTA
TCGCTGATTG GCTTTACTAC ACTTACGCAA TCTGTTACGG TAGCAGCGGA CAAACAGATC
GATGTGACTT TCCAGCTGGC TGTTTCAGAC AAACAGTTAC AGGAAGTAGA GATCACCGCA
AACTCTAATA AATTTGCAAA AAAAGAAACC TATAATGTTT CCCGCTTGCC TATCAGCAAT
CTCGAAAATC CACAGGTATA CAGCGTTATT ACCAAGGAGC TGATGGGAGA GCAGATTGTA
ACAGACTACC GTGATGCGGT TAAAAATGCG GCCGGAGTGA ATACCCTTGA GCAGGTGTCT
AATGGACGTA GTTCTACTAT TATCCGCGGA TTCCGTACGC CTAACTATTT ACGTAACGGA
CTGGTCGCAA ATCAGCTGAC AACGATCGAT GTTTCCAACG TAGAACGTAT TGAAGTGATT
AAAGGCCCAT CAGGTACACT GTTCGGTTCA GGTGCTGTAT CTTATGGCGG CGTGGTGAAC
AGGGTGACAA AACGTCCTTT TGACGTATTT AAGACGGACG TAACCTATAC TGGTGGTAGC
TTTAGCCTCA GCAGACTGAG TGTTGACATG AATGCGCCAC TGGATAAAGA CAAGAAAACC
CTGCTGCGTG TAAATGCAGC CCGTCATTCA CAGGAAGGTT TCCAGGAAAA TGGATTTTCG
CGCAATTACT TTTTTGCACC TACCTTGTCT TATCAGGTGA ATGATAAAAT GTCTTTCCTG
ATAGATGCAG AGGTATACCG CAATTTCGGT ACCAGCATTG GTATGGGTGT TACGCCTAAC
CCGGCTGCTT TGCCAAAGCA AAAAAGCATG AAAGATCTGT TACCATACTA TTTCCGTACC
TTCAGCAGTG ACGATCTTAC TTCAACCTTC CCTGGTTACA ATTTCTACGG CGCCATGAAT
TATAAATTCA ACAGCAGGTG GAGTTCTTCT ACCTCTTTTA ACTATGGTGG TATAGATGCA
AAGAATCAAC TGCAGTTTAC ACCTACAATG CTCAATGACA CGCTTATGAG CAGGCAGGTA
CAGAAGTATA ACCATCATTA CTATGCTGTA CAGGTGATGC AAAACATCAA TGGTGAATTT
AACATAGGAC GCTTCCGGAA TCGTATGGTA ATTGGTATTG ATTACCTCGC GGATGTTACG
AAACCTACCT ATATTCAACG TTTCCTGTAT GATTCAATAA ATTATACCAA ACCTGCAACG
CCATTCATTA CGATAGAGAA AGTAAATCAG CGTTTGGCGC AGTTGCCATT GACTTCCGCT
ACTACCAGCA AGACATTACG TTATGGTGCC TATGCATCTG ATGTAGTAAA TATCACGGAG
CAGTTAATGG TCATGTTAAG TTTGCGTCTG GACAGGATAG AATCAAAAGG TAGTACAAAC
CTGCTGACAG GTGTCACAAC CGGTGCATAC GATAAAACTG CCTTGTCTCC GAAGTTGGGT
ATCGTATATC AGGTTATCAA AGACCAGCTG TCTGTTTTTG GTAATTACCT GAATGGTTTT
AACTATTCCT CCAGTCTGGA TATCAACGGA AATGTATTCA AACCGGAGAT GGCGAATCAG
CTGGAAGGTG GTGTAAAACT TGAGATGCTG AACAAGCGTA TTACGGCAAC TGCCACTTAT
TATGATATTG AAGTATCCGA AAAACTGCGT ACTGATCCTA ATGACAACCG TTACCTGGTA
CAGGATGGTA CACAGCGTAG TAAAGGTTTT GAAGCTGAGC TTATCGCTAA CCCGCTTGAC
GGATTGAATA TCGTGGCAGG TTATGGCTAC AACGATAGCA AGTACACAAA GTCGGATAAA
ACGATAGAAG GTAAAACGCC GGCACGGGCA CCAAAGAATA TGATCAATGC CTGGATCAGT
TATCGCGTGA CGAACGGCCC TGTAAGAGGT CTCGGATTGG GTTTTGGAGG CAACTATAAC
AGTGATAACT ATTATAATGA CCAGAATACT TTTACCAATC CTGCCTTTAC GGTGTTAAAT
ACAAGTATCT TCTATGATCA GCCCCGTTAC AGACTGGGTA TCAAAGTGGA TAACCTGGGA
GACGAGCGTT ATTGGGGGCC CTATGGTAAT CCTCAACCAC CGCGATCTAT TGCAGGTAGC
GCCACTTTAA AGTTCTGA
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| Protein sequence | MTVPLNKYLL FVVAMLCLFL NVNAADAPKG SIKGKVITSD GNAAPSVTVV LKETKKHAIT
NENGEFILRD VPAGTYELVV SLIGFTTLTQ SVTVAADKQI DVTFQLAVSD KQLQEVEITA
NSNKFAKKET YNVSRLPISN LENPQVYSVI TKELMGEQIV TDYRDAVKNA AGVNTLEQVS
NGRSSTIIRG FRTPNYLRNG LVANQLTTID VSNVERIEVI KGPSGTLFGS GAVSYGGVVN
RVTKRPFDVF KTDVTYTGGS FSLSRLSVDM NAPLDKDKKT LLRVNAARHS QEGFQENGFS
RNYFFAPTLS YQVNDKMSFL IDAEVYRNFG TSIGMGVTPN PAALPKQKSM KDLLPYYFRT
FSSDDLTSTF PGYNFYGAMN YKFNSRWSSS TSFNYGGIDA KNQLQFTPTM LNDTLMSRQV
QKYNHHYYAV QVMQNINGEF NIGRFRNRMV IGIDYLADVT KPTYIQRFLY DSINYTKPAT
PFITIEKVNQ RLAQLPLTSA TTSKTLRYGA YASDVVNITE QLMVMLSLRL DRIESKGSTN
LLTGVTTGAY DKTALSPKLG IVYQVIKDQL SVFGNYLNGF NYSSSLDING NVFKPEMANQ
LEGGVKLEML NKRITATATY YDIEVSEKLR TDPNDNRYLV QDGTQRSKGF EAELIANPLD
GLNIVAGYGY NDSKYTKSDK TIEGKTPARA PKNMINAWIS YRVTNGPVRG LGLGFGGNYN
SDNYYNDQNT FTNPAFTVLN TSIFYDQPRY RLGIKVDNLG DERYWGPYGN PQPPRSIAGS
ATLKF
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