Gene Cpin_2488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2488 
Symbol 
ID8358646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3064384 
End bp3064887 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content44% 
IMG OID644964674 
Producthypothetical protein 
Protein accessionYP_003122177 
Protein GI256421524 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAAAT TATTACTGCT GCTGCTTGCA CTGGCGCCTT TTACTATCCT GTCCGCACAA 
AATAAACGTG CGATCAAACA CAATCAGTCT TTATCGGTGG CTTATCTGGC GATTAAAGAT
GGACTGGTAA AGAACGACTC TATTGCTGTG AAAAAAGCAG CTATTGCAAT GACTGCTGCA
CTGGAGGAAT TCAAACCCGC CGGTATGAAG GCGTATTCAC AGCAGACTTT TGATGCAACC
AAGACCAGAT TACTGGCAGA TGTGACCAGC ATGGCCGGTA CACAGAACGT GAACAAACAA
AGAAAATATT TTGCTGGTTG CTCCGAGGCT TTCTGGCAAC TGACAGGTAT CATTCCGATG
TATAAGTCAA CATTTTATTA TCAGCAATGT CCGATGACAG GTGTTACCTG GGTAAGCAAC
ACAGATGAAA TCAAAAATCC GTATTATCCT AAGAATATGC TGACCTGCGG GAAGGTTATC
GGGGAACATA CGGTTTCGTT GTAA
 
Protein sequence
MRKLLLLLLA LAPFTILSAQ NKRAIKHNQS LSVAYLAIKD GLVKNDSIAV KKAAIAMTAA 
LEEFKPAGMK AYSQQTFDAT KTRLLADVTS MAGTQNVNKQ RKYFAGCSEA FWQLTGIIPM
YKSTFYYQQC PMTGVTWVSN TDEIKNPYYP KNMLTCGKVI GEHTVSL