Gene Cpin_2473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2473 
Symbol 
ID8358631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3049029 
End bp3049571 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content47% 
IMG OID644964659 
Producthypothetical protein 
Protein accessionYP_003122162 
Protein GI256421509 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.947567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.271758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGAT ACACACTTCT TCTGGTCAGC ATCTTATGCT TTCAGCAGAC CGTCGCACAG 
GTAAAGGAAG AGAAGGCGCC TGCTACCCTG AAATCCGTAT TGTTAGCGCA GTATAAATCT
ACCTGGGATC AACAGGAATG GTTTGTACCT GTAGAAAAAG GAATTGAGGG TATTACTGCT
CAGCAGGCAT CCTGGAGACC CGCTGATTCC AGTCACTCAG TAGGAGAGCT GGCTTATCAC
CTGCTCTTCT GGAACAAACG GCTGCTGGAT CAGTTTAACG GGAAAAAGGA AGCCGATTTC
AACGGAAACA ATAACCAGAC TTTTGACGCA TTTACAGAAG CATCCTGGAC GTCCATTACG
CAACAATTAA AGCAGGTAAT GGCAGACTGG GAGAAAGCGA TTGAAGGAGC GGATGAAGCA
AAACTCCGCT CCTGGTATGG CAATATTGCG AATATGAATA CGCACAATGC CTATCATACA
GGACAGATCC TCTATATCCG TAAACAGGCG GGTAACTGGG ATGCTGCCAA AGGCGTAAAG
TAA
 
Protein sequence
MSRYTLLLVS ILCFQQTVAQ VKEEKAPATL KSVLLAQYKS TWDQQEWFVP VEKGIEGITA 
QQASWRPADS SHSVGELAYH LLFWNKRLLD QFNGKKEADF NGNNNQTFDA FTEASWTSIT
QQLKQVMADW EKAIEGADEA KLRSWYGNIA NMNTHNAYHT GQILYIRKQA GNWDAAKGVK