Gene Cpin_2472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2472 
Symbol 
ID8358630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3048324 
End bp3048977 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content48% 
IMG OID644964658 
Producthypothetical protein 
Protein accessionYP_003122161 
Protein GI256421508 
COG category[R] General function prediction only 
COG ID[COG3571] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.26433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAGTA CTTCCCTGTC ATTGACATTA CCGGCTTCGC TGGGACAGGT ATCAGCAATA 
TGTATGGTAC CTGAAAATCC TGTTTGTATG ATGACCCTGG CCCATGGTGC AGGTGCTGGT
ATGGAACATG TATTTATGGA AACATTGGCC GGATCGCTTG CTGCAGGAGG CATCGGGACA
CTACGTTTTA ACTTCCCGTT TACCGAGCAA AAGAAGTTCA GACCAGACGC TCCGGCGGTT
GCCCATCAGA CGATCGCGAC TGCCATTGAC AAGGCGCTTG AATTATATCC TTCATTGCCG
CTTTTTGCGG CAGGAAAATC ATTTGGCGGC CGTATGTCTT CTCAGTACCT GTCTGTCAAT
CATCGTCAGG ACGTAAAAGG ACTCATATTT TACGGTTTCC CCCTGCATCC TGCCGGTAAG
CCTTCTATTG AAAGAGCGGA GCATTTAAAA GAGGTTAAAC TGCCTATGTT GTTCTTACAG
GGAACAAAAG ATACCCTGGC TACTATGGAA CTGATAACAA CTGTATGTAA GTCCCTGAAG
AAAGCTACAC TGGTGAAACT GGAAGGCGCA GACCACTCTT TTAAGGCAGG CAGGAACAAA
GACACGATAC CGCTGTTAAC GGCGGAAACT AAAGGGTGGG TGGAAAAGCA CTGA
 
Protein sequence
MVSTSLSLTL PASLGQVSAI CMVPENPVCM MTLAHGAGAG MEHVFMETLA GSLAAGGIGT 
LRFNFPFTEQ KKFRPDAPAV AHQTIATAID KALELYPSLP LFAAGKSFGG RMSSQYLSVN
HRQDVKGLIF YGFPLHPAGK PSIERAEHLK EVKLPMLFLQ GTKDTLATME LITTVCKSLK
KATLVKLEGA DHSFKAGRNK DTIPLLTAET KGWVEKH