| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2470 |
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| Symbol | |
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| ID | 8358628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3044838 |
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| End bp | 3047222 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644964656 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003122159 |
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| Protein GI | 256421506 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.555764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.521946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGAC TACAAGCTGT TTTTTTCCTC CTTTTCCTGA CTTCAGTTGT CAATGCACAA
CAGCAACACG GCAGTATCAG CGGTATTGTA AGCACTAAAA ATGGTGAACC GGTAGCGTAT
GTAACCGTAG GTGTCAAGGG GACATCATAT GGCGCTACGA CCACTGATAA AGGAAACTTC
CGTATTAATC GTATTAATCC TGGTACTTAT ACAATCAGTG TCAGTGCTGT TAACATCATT
TCGCAGGAGA AACAGGTAAC GGTTAACGCC GGCCAGAATG AGATAATTAA TTTTGAACTG
GACCTGAGTA ATACCCAGCT GAAAGAAGTA ATGGTAAATG CCCGTAGCAA CAGTGTGAAG
ATGGATAACC CATCTCAGTC CCTGCGTTTA CAGGAACCAC TGATCCAGGT GGCACAGAAT
ATCCAGGTTG TGTCAGCACA GTCTATCAGG GAACAGCAGA TCATCAGCAT GAGTGATGGG
ATCATCCGTA ACGTGAGCGG TGCAGTAAGA TTAGAACACT GGGGCGACTT ATATACAAAC
ATTACCATGC GTGGTTCACA GATAAAGGCT TTCCGGAATG GTTTCAACGT CGTGAGTTCC
TACTGGGGAC CACTGACAGA AGATATGAGC TTTGTTGATC ACATTGAATT TGTAAAAGGA
CCTGCGGGTT TTATGATCTC TGCCGGTGAT CCAAGCGGAT TATACAATGT AGTGACTAAA
AAGCCGACCG GTCAGACTAA AAACGAGTTT AGCTATACCG TAGGTAGCTT TAACCTTAAC
CGTGCGTCAC TGGACCTGGA TGGTAAATTG AGTAAAGACG GCAAACTGTT ATATCGTCTC
AACCTCTCCG GACAGAACAA AGGTTCCTTC CGTGCCAATG AATTTAATGA CCGTTATGCC
ATTGCTCCGG TACTTTCATA CCAGGTAGAC GATAAGACGA AATTAACGGT AGAATATGTT
TACCAGCGTG CGAATATGTC AGACGTCGGT TCTTACTATA TATTCACGCC TAAAGGATAT
GGTGCATTAC CAAGGGATCT CTCTGATCTG CCTTCCGGTT TGCCACCAAC GAAGATCAAT
GACCACAGTT TTACCGTGAA TCTCCAGCAT CAGATCAATG AAAACTGGAA ACTGACTGCC
CAGGCTGCCT ATTATAAATA TAGCCAGGAT GGTACTTCTA TGTGGGCTGA TTCCGTGGAA
GCAGATGGGA GATATTACAG GAATGTCGGT ATATGGGAAG CTAAAAGCGC GATGTCCCTG
GGCCAGATCT TCTTAAATGG CAAAGTAACT ACCGGCCCTG TCGTACACAA GATCTTAGCA
GGTATTGATC TGGGTGATAA GCGATATACC GCTGACTACG CACAGACGCA TTCACTGGAT
ACAGGATCTG CTCCTTTTGA TCCCAATCAT CCCAACCTCG ATTATCCTTC CAACGGGTAT
CCGGTATATG ATCGTACTTC AAGCCTGGAA GCAAGAGCGG CGGCGGGATT TGGTCTGATT
AACTCCAATT ATTCCAGCCT TTACCTGCAG GATGAACTGG GCTTCCTGAA CAACAGGATA
AGATTAACAC TGGCAGGTCG TTATACCTAC ATCAGTCAGT CTGACTTTGG TACAACATCG
AAAGCAAAAC GTTTCACGCC GCGTGTGGGA CTGAGTGTTT CTATTGACGA TTTCACTGCT
GTGTATGGTT TGTATGACCA GGCATTTACA CCACAGGCGG GCGCTGTCAG TATTGGTAAG
TTAAAACCAT TGACAGGCAA TAATATTGAA TTTGGTATCA AAAGAGACTG GCTGAATGGA
AAATGGAATA CCACTGTAGC GGTATACCGC ATATTGAAAG AGAACGAACT GACAGCTGAT
CCGAATGCCC CTGCTAATTC CGGTCTGAGC ATCGTATTCG GCCAGCGCAG AGCGCAGGGT
ATAGAGTTTG ATCTTCGTGG AGAATTACTG CCGGGACTGG ATCTGACAGC CAACTATGCA
TTGACTGAAG CGAAAGTAAG TAAGGTAAAT CCAGGTATCT CTGAAGCTAC CGGTATAAAA
GTAGGGGATG TAGTACCCGG CTATTCCAAG CATGTGGCAA ATGCCTGGCT GACTTACAAG
TTGCTGAACG GCGCTTTGAA AGGAGCGGGC GTTTCTGCCG GCTTTACTTA CCTGGCAGGT
CGTGAGACGG ATACCTGGAG TGTTGGTCTG CAACGCTTAC CTGATTACTT TAAGATGGAA
GGTGGCCTGT TCTGGGAAGG AAGTAAGCTG CGTATCGGTG CTAACGTGTT TAATATCTTT
GATAAGTATT TATACAGCGG TTCTTACTAT TCTTACCTGA ATGCTTATTA CTATCAGGCG
GAAGCACCAC GTAACTACCG GCTTTCTGTT TCCTACAAAT TCTGA
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| Protein sequence | MRRLQAVFFL LFLTSVVNAQ QQHGSISGIV STKNGEPVAY VTVGVKGTSY GATTTDKGNF
RINRINPGTY TISVSAVNII SQEKQVTVNA GQNEIINFEL DLSNTQLKEV MVNARSNSVK
MDNPSQSLRL QEPLIQVAQN IQVVSAQSIR EQQIISMSDG IIRNVSGAVR LEHWGDLYTN
ITMRGSQIKA FRNGFNVVSS YWGPLTEDMS FVDHIEFVKG PAGFMISAGD PSGLYNVVTK
KPTGQTKNEF SYTVGSFNLN RASLDLDGKL SKDGKLLYRL NLSGQNKGSF RANEFNDRYA
IAPVLSYQVD DKTKLTVEYV YQRANMSDVG SYYIFTPKGY GALPRDLSDL PSGLPPTKIN
DHSFTVNLQH QINENWKLTA QAAYYKYSQD GTSMWADSVE ADGRYYRNVG IWEAKSAMSL
GQIFLNGKVT TGPVVHKILA GIDLGDKRYT ADYAQTHSLD TGSAPFDPNH PNLDYPSNGY
PVYDRTSSLE ARAAAGFGLI NSNYSSLYLQ DELGFLNNRI RLTLAGRYTY ISQSDFGTTS
KAKRFTPRVG LSVSIDDFTA VYGLYDQAFT PQAGAVSIGK LKPLTGNNIE FGIKRDWLNG
KWNTTVAVYR ILKENELTAD PNAPANSGLS IVFGQRRAQG IEFDLRGELL PGLDLTANYA
LTEAKVSKVN PGISEATGIK VGDVVPGYSK HVANAWLTYK LLNGALKGAG VSAGFTYLAG
RETDTWSVGL QRLPDYFKME GGLFWEGSKL RIGANVFNIF DKYLYSGSYY SYLNAYYYQA
EAPRNYRLSV SYKF
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