| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2465 |
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| Symbol | |
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| ID | 8358623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3036448 |
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| End bp | 3039861 |
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| Gene Length | 3414 bp |
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| Protein Length | 1137 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644964651 |
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| Product | heme-binding protein |
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| Protein accession | YP_003122154 |
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| Protein GI | 256421501 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1413] FOG: HEAT repeat |
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| TIGRFAM ID | [TIGR02603] putative heme-binding domain, Pirellula/Verrucomicrobium type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TGCTTGCTTT AAAAGGTCCT ATTCTGGCAT CACTGCTTTT TTCTGCGGCC
TGTCTCACCG CCTGTAAACA AGATTCCGGC CCCGCAGACA AGCGGATCAA ACGGATGGAT
ACGACGCTTA CAGCTCACCT GGCGGACTCA ATCACCAGTA TTGTGAAACC TGAACTGGCG
GAAGGACTTT CCCTTAGTCT CTGGGGGATT GATTCGCTTG TGATCTCTCC TATTGGTATC
GATATAGATG ATCAGGGACG TGTATACTAT ACGACTACTG ACCGGCAAAA ACATTCCGAA
TTTGATATTC GCGGACACCG GGACTGGGAG ATACCATCTA TCAGTCTGCA AACCGTAGAA
GACCGCCGCG CCTTCCTGCA CAAGGAGTTA TCTCCTGAAA ACAGTAAACG GAACCTGTGG
CTGGAAGATC TTAATGGCGA CAGTTCTCAC GACTGGCGTG ACCTGGCCAT AGAAAAAGAA
CATGTATACC GCTTAGATGA TATTACCGGA GACGGAGTCG CTGATCAGTC ACAAATGGTT
GTAGATGATT TTCACGATGA AGTGACTGAC GTTGCCGGTG GTGTACTGAG TGACGGCGAT
GATCTGTACC TGGCTGTCGC GCCTGACCTC TGGCGTATTA GAGATAAAAA CCACGATGGT
ATTGCAGATG AAAAGACTTC TATCTCTCAT GGCTATGCCG TTCATGTGGG CTTTAGCGGC
CATGGTATGT CAGGTGTGGA AATGGGGCCT GATGGGCGTA TCTACTGGCA GATAGGTGAC
ATCGGTTTTA ACGGCAAAGG CCCTGATGGT AAAGAATGGT CTTTCCCTAA CTGTGGCGTA
TTAGCCCGCT CCAATCCCGA TGGCAGCGAT TTTGAAATCT ATTCATATGG TATCCGTAAT
ACACACGAGT TTGCCTTTGA CGAATATGGT AATATTATCA GTGAAGACAA TGACGGCGAC
CATCCTGGTG AAAAGGAACG CCTGGTATAC CTGGTAAATG GTGGCGATCA GGGCTGGCGC
AGCAACTGGC AATATGGTAA ATATAATGAT CCGGACAACA ACACCTATAA AGTATGGATG
GATGAAAAGA TGTACCTGCC CCGTTTCGAA GGACAGGCGG CTTACATTAC TCCCTGCATC
AGTAATTTTG TAAGTGGTCC GGCTGGTTTT GTATACAATC CTGGTACAGC ATTAGGCCCT
GCTTATAAGA ATACCTTCTT TGTGGCAGAG TTTGTAGGCA ATCCATCCAA CTCCGGCGTA
CACGCCTTCA AACTGAATCC TAAAGGCGCC ACTTTCGAAC TGGGCGAACA TAAGAAAGTA
CTGGGGGGCA TACTGGCGAC CGGTATTGAT TTTGGTCCGG ATGGCGCACT CTATGTAGCT
GACTGGATAG ATGGCTGGGA TACCCATAAC TATGGACGTA TCTGGAAACT GGATGATAAA
AAAGACGCTG CCAGTGCTGA ACGTAAATTA ACCAAAGCAC TGCTGGCAGA AGATTTCAGC
AAACGTAAGG AAGCCGATCT CGCTGGCTTA CTGAACAACC CGGACATGCG TGTACGTATG
AAAGCCCAGT TTGAACTGGT AAAACGGAAG GAAAAGGGCG CACCATTGTT TGAACAGGCA
TTGAAACAAA CAGACAATCA ACTGGCAAGG GTACACGGCA TATGGGGATT GAGCCAGCTG
GCACGTCAGG ATAAACAATA TGCGAAAGCT TTATTACCAC TCCTGAAGGA TAACGATCCG
GAGATCCGGG CCCAGGCAGC CAAATGGCTG GGAGATATCC GTTACAAAGA AGCAGGTGCA
GCACTTGTGC CATTATTAAA AGATACTGCC AGCCGTGCAC GTTTCTTTGC AGCAGAGGCA
CTGGGTAGAA TAGCATATGC ACCTGCGGTA CAACCACTGA TTGCATATCT TGAAGCCAAT
AACGATGTAG ACGCCTATCA GCGTCATGCC GGTACGCTGG CATTGTCGCG TATAGGAGAG
GCAGCGCCAT TGATCGCATT GGCCAACAAT CCTTCGCGTG CGCTGCGTAT AGCGGCAGTC
GTAACACTCA GAAGAATGAG TCATCCGGGT ATTGCGGCAT TTCTGAATGA TAAAGATGAA
TTTGTCGTAA CAGAAACTGC CCGTGCCATC AACGATGATC TGTCTATTAA AGATGCTTTA
CCGGCACTGG CCAAACTGCT GGTCACTACT TCCTTTAAAA ATGAAGCCCT GATCCGACGT
GCAATCAATG CGAATCTGCG GGTAGGTACA GACAGTGCAC TAAATAATCT TCTCTCCTAC
GCACAAAAAG CGGGTAGCCC TGCTCCTATG CGTGCAGAAG CTATAGACGC ACTGAGTGTA
TGGGCTAAAC CATCCGTACT GGATCGTGTA GATGGCCGCC TCAGGGGAGA AATAAAAAGA
AACGCAGCTC CGGTAGTGCA TCTTTCCACC TCTCCGCTTA CCGCCTTATT AAAAGACAAA
GAGTTACCGG TACGTATCAG CGCTGCCAGA GCGATTGCCA AATTACAGAT CAAACAGGCA
GGAACATCAT TGCTGGCGGC TGTACAGGCA GACCACGATG CTGATATGCG CGTTGCCGCA
TTAGAAGCGC TGGTCGCCTT ACAGGACGCA GGTATGGAAC AGGGTATTAC AGCCGCCCTG
ACTGACAAGG AGAAAGCGGT ACGTGTAGCA GGTCTTGATC TGTTGGGTAA AATGCATATC
TCTGAAAACG TGATGGTAAA ACTGCTCATG GGCGTGATTG CCAATAAAAC GGTGGAGGAA
AAACAGGCAG CCCTGCTGAC ACTGGGTAAA CTGCCACAAC AATATGTGGA AAAACCACTG
AGCGAATTAC TGGATAAAAT GGCTGCCGGA CAACTGGATA AAGGTATCTA TCTTGAGTTA
GGAGAAGCAA TTGATAGCAG TCGTTCCAGC GCACTGGCTA CCCGTTATAA AACAATCAAT
AGCAAAGTAT CGCCGGACGA TCTGATGGCT TCCTACAGCA GTTGTCTGCT TGGAGGCGAT
CCTAAACGTG GCAGGCAGAT ATTCTTCCAC AACCAGAATT CACAGTGTAT GCGCTGTCAC
TCGTATGATG ACCGGGGAGG TAACGCAGGT CCCAGACTGA ACGGCGTTGC CGGACGGATC
ACCAGAGAGC AGATATTGCA GGCACTTATT ACACCGAGTG CAAGACTGGC TCCTGGTTTT
GGTATGGTGA CGCTTGAGCT GAAAGATGGT AAAAAACTGA CCGGCATCCT ACAGGGAGAA
ACCAAAACAG CACTAAAGAT CAAAGAAGGA CAGGAAGAAC GCACCATCGC CGCCGACCAG
ATCGTCAATA AAAAATATGC GGAGTCCAGT ATGCCGGATA TGAAACTGCT GTTGTCAAAG
AAAGAAATAA GGGACGTGGT AAGTTTCCTG GCGGAACAGA AAACGGACAA TTAA
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| Protein sequence | MKKLLALKGP ILASLLFSAA CLTACKQDSG PADKRIKRMD TTLTAHLADS ITSIVKPELA
EGLSLSLWGI DSLVISPIGI DIDDQGRVYY TTTDRQKHSE FDIRGHRDWE IPSISLQTVE
DRRAFLHKEL SPENSKRNLW LEDLNGDSSH DWRDLAIEKE HVYRLDDITG DGVADQSQMV
VDDFHDEVTD VAGGVLSDGD DLYLAVAPDL WRIRDKNHDG IADEKTSISH GYAVHVGFSG
HGMSGVEMGP DGRIYWQIGD IGFNGKGPDG KEWSFPNCGV LARSNPDGSD FEIYSYGIRN
THEFAFDEYG NIISEDNDGD HPGEKERLVY LVNGGDQGWR SNWQYGKYND PDNNTYKVWM
DEKMYLPRFE GQAAYITPCI SNFVSGPAGF VYNPGTALGP AYKNTFFVAE FVGNPSNSGV
HAFKLNPKGA TFELGEHKKV LGGILATGID FGPDGALYVA DWIDGWDTHN YGRIWKLDDK
KDAASAERKL TKALLAEDFS KRKEADLAGL LNNPDMRVRM KAQFELVKRK EKGAPLFEQA
LKQTDNQLAR VHGIWGLSQL ARQDKQYAKA LLPLLKDNDP EIRAQAAKWL GDIRYKEAGA
ALVPLLKDTA SRARFFAAEA LGRIAYAPAV QPLIAYLEAN NDVDAYQRHA GTLALSRIGE
AAPLIALANN PSRALRIAAV VTLRRMSHPG IAAFLNDKDE FVVTETARAI NDDLSIKDAL
PALAKLLVTT SFKNEALIRR AINANLRVGT DSALNNLLSY AQKAGSPAPM RAEAIDALSV
WAKPSVLDRV DGRLRGEIKR NAAPVVHLST SPLTALLKDK ELPVRISAAR AIAKLQIKQA
GTSLLAAVQA DHDADMRVAA LEALVALQDA GMEQGITAAL TDKEKAVRVA GLDLLGKMHI
SENVMVKLLM GVIANKTVEE KQAALLTLGK LPQQYVEKPL SELLDKMAAG QLDKGIYLEL
GEAIDSSRSS ALATRYKTIN SKVSPDDLMA SYSSCLLGGD PKRGRQIFFH NQNSQCMRCH
SYDDRGGNAG PRLNGVAGRI TREQILQALI TPSARLAPGF GMVTLELKDG KKLTGILQGE
TKTALKIKEG QEERTIAADQ IVNKKYAESS MPDMKLLLSK KEIRDVVSFL AEQKTDN
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