Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2444 |
Symbol | |
ID | 8358599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3003889 |
End bp | 3004848 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644964628 |
Product | anti-FecI sigma factor, FecR |
Protein accession | YP_003122134 |
Protein GI | 256421481 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATACC TGAAAATAAA ACGCTTATTC AGGAAATACC TGGCCGAAAA GGCGGATGAT GAAGAGCGAA GATTAATTGA ACATTGGTAT GATAAACTCG ATAAACGCGA GCCAATACAA CTGTCAGCTG CTGAAGAAGA ACAGCTGGAG GATGCTATCT GGCAAAGGTT AGAACCGATG TTGTCAGCAC CACAACGGAA TACACGCAGA TTATATACCT ATATCAATGT AGCTGCCAGT GTTGCCGTAC TGGTATTTGC CAGTGTGTTC TATTTAAAGC GTAGCAAAAC GGAAGGACAG AAGACGGCTG ACGTCAGTGA ACTGTTCCAG GATTACTATA CCGCGAAAGG AGAAAGGAAG CAGCTGAGAT TACAGGATGG TAGTGTGATC GCAATGAACA GCGCTACTCA TGTGCGGGTA TATCTTGATT TCAGTACCAG CAGACGTGCC GACCTGACCG ATGGAGAAGC ATTCTTTGAA ATACAGCATG ACCCGGTACA TCCTTTCATC GTCCGTTCCG GTAAATTGAT CACACATGTA CTGGGTACCG CTTTTAATAT CAGGGCCTAT AAAGAGCTGA GAGAAATCTC CATTGCGGTG ACAGACGGAA AGGTACAGAT CTCTGACACC TTACAGGCGC TGGGCATCGT AGGGAAACAA CAGAAACTGG TGTTCAACCA GCAACAGGCC ACTTACGATA TCCAGTCCTT TTCAGAAGAT GTAACAGGCT GGAAAAGCGG AAAGCTGATC ATCAAAAATG CCCTATTTGA AGATATGGCA TTACTCATGG AAAAAAATTA CGGCATAACA CTTTTAACAG CCAGGGCCGA TCTGCGTAAA AAGAAGTTCA CTGCAAGCCT TCCTTTATCG CTGTCTGCCG CCAAAGCTGC TGAAGTCATC GCATCTATTC ATCAACTTAA AATCAAACAG GGGAGGGATA CTATCGAACT ATACCGCTAA
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Protein sequence | MKYLKIKRLF RKYLAEKADD EERRLIEHWY DKLDKREPIQ LSAAEEEQLE DAIWQRLEPM LSAPQRNTRR LYTYINVAAS VAVLVFASVF YLKRSKTEGQ KTADVSELFQ DYYTAKGERK QLRLQDGSVI AMNSATHVRV YLDFSTSRRA DLTDGEAFFE IQHDPVHPFI VRSGKLITHV LGTAFNIRAY KELREISIAV TDGKVQISDT LQALGIVGKQ QKLVFNQQQA TYDIQSFSED VTGWKSGKLI IKNALFEDMA LLMEKNYGIT LLTARADLRK KKFTASLPLS LSAAKAAEVI ASIHQLKIKQ GRDTIELYR
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