| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2443 |
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| Symbol | |
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| ID | 8358598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3003009 |
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| End bp | 3003608 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644964627 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003122133 |
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| Protein GI | 256421480 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGCCAC CAGATACAGA AGATAATTTT TCACTGTTCT CCGCCGCTAA AGGGGATGAT
ACTGTTGCAT TTAAAGCTTT ATACCAACGC TATTGGAAGA AGCTTTATAT CAGCGCCTGC
AAACGCGTGG ATACCGATGA TGCAAAAGAT ATCGTGCAGG ACGTCATGCT GACCCTGTGG
AGACGAAAGA ACGAAATTAC TATTGACAGC GAGGAAGACC TCAGCCGTTA CCTGTATTCT
GCCCTGCGCT ACCGCATTAT TTCCTATTAT GCCTTCAGTA GCTCTACCGT ACAGATCCCT
GAATGGTTTG ACCAGCCAGT ACATTCCTCT TTTGAGTCTT CTTTTGATGT CCGTAAGCTA
AAAGACCTGA TTGACGGGGA AGTAGACCGC ATGCCTGACC GGATGCAACA GATTTATCAC
CTGAGTCGTG AGGAAGACCT GTCTGTAACA GATATCGCTA TCCAGCTCAA TCTCTCCGAG
CAGACCGTTC GTAATCAACT ATCCCTGGCC ATGAAGCGCC TGAGAGACCT GCTGAGGAAT
CATCACCAGA GTGACCTGGT GATCTGTTCG TTGTTAGTGT TGGACGTGTT TTTAAATTAG
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| Protein sequence | MRPPDTEDNF SLFSAAKGDD TVAFKALYQR YWKKLYISAC KRVDTDDAKD IVQDVMLTLW
RRKNEITIDS EEDLSRYLYS ALRYRIISYY AFSSSTVQIP EWFDQPVHSS FESSFDVRKL
KDLIDGEVDR MPDRMQQIYH LSREEDLSVT DIAIQLNLSE QTVRNQLSLA MKRLRDLLRN
HHQSDLVICS LLVLDVFLN
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