| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2441 |
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| Symbol | |
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| ID | 8358596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3000730 |
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| End bp | 3001347 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644964625 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003122131 |
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| Protein GI | 256421478 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAG TAAAAACCGC CATCACTGCT TCGCCGACAG TATCTCCACA GGAGGAAGTA
TGGAACCAGT TCCGGCAAGG TAGCCGTGAC GCCTTTGCCC TGATCTACCA GGAGCACGCA
GACCACCTGT ATCATTATGG CTGCCATTTC TGCGGAGACG TAGAAATGGT AAGAGACGCC
ATGCAGGAAC TCTTTCACGA TCTATGGCAA ACCAGGGAAC ACCTGGCCGA CCAGATCCAG
CATATCCGTT ACTATCTGCT CAGCAGCCTT CGCCGCCGTT TATTACGGAC TTTAGAGAAG
AACAGACGCT TGTTAACCAG TACCGTAGAT ATACCCGGCG ACTTTGAGCT TATTCCCAGT
AAAGAGCACC TGATCATACA GGATGAAAGT CAGCAGGAAC AGCTACAACA ATTATATGCT
GCCCTGAATG CCTTGCCGCG CAGACAGCGG GAAGCTATTT ATCTGAGGTT CTTTCATGAA
CTGTCTTACC AGGAAATAGC TGGTATGATG TCTATGAAGG TAGATTCTGT GTATAATATT
ATCTCGAAGG CGATCGGGAT GTTGAAGAAG ATGTTGCCGC CGGCGTTGAT GGTATTGTTG
TTGTACCGGG CGAGATGA
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| Protein sequence | MKAVKTAITA SPTVSPQEEV WNQFRQGSRD AFALIYQEHA DHLYHYGCHF CGDVEMVRDA
MQELFHDLWQ TREHLADQIQ HIRYYLLSSL RRRLLRTLEK NRRLLTSTVD IPGDFELIPS
KEHLIIQDES QQEQLQQLYA ALNALPRRQR EAIYLRFFHE LSYQEIAGMM SMKVDSVYNI
ISKAIGMLKK MLPPALMVLL LYRAR
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