Gene Cpin_2433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2433 
Symbol 
ID8358588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2992249 
End bp2992935 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content47% 
IMG OID644964619 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003122125 
Protein GI256421472 
COG category[R] General function prediction only 
COG ID[COG3393] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000357302 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.518227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAC ATTTCGAAAT GCTGGATAAT CCGGTCTGGC AGGCTTTACA GACAATACAT 
CAGTCATTTG CCCAAGGAAC CGCACACGTA CAGCGATATC CTGCGGGCGT CTTACAGTTC
ATGGGATGTG CTGATCCGGC AAGTGCTGAT ATCAATGAGA TTTTACCCTG GACAAGTGTA
GGAGAGAAGC TGATCATCAT TGGTGAATTA CCTGCATTGC CTGATAACTG GGCGCTCGTA
CGTCAGCTGG ATTGTATCCA GATGACCTGT GAAGAAACAT CTCCTGTTGA TGAGAAAGAA
ACGGTACTCG CGTTGGATGA AAAGGATATT CCTGATATGC TGGCCCTGAC CGGCCAGGTA
CAACCGGGTT TCTTCTTTGA TGGTACTCCT TTACTGGGGC AGTACTATGG TATCCGGCAG
AAGGGGCAAC TGGTGGCCGT TGCAGGAGAA CGTACAAAGG TGACAGGGAT GATAGAAATA
AGCGCTGTAT GCACACATCC GTCATTTACC GGCAGAGGAT ATGCACAACA GCTGGTGACA
CATATCATGG ATACTAACAT TGCCGCAGGG AATGCCTTGT ACTTACATTT TGTCAACACC
AATGACAGGG CCAGGAACGT ATATGAGTTA CTGGGCTTCA AATACAGACG TCCGATTGTG
TTCTGGGAGA TTATCAGAAA CAGCTGA
 
Protein sequence
MLKHFEMLDN PVWQALQTIH QSFAQGTAHV QRYPAGVLQF MGCADPASAD INEILPWTSV 
GEKLIIIGEL PALPDNWALV RQLDCIQMTC EETSPVDEKE TVLALDEKDI PDMLALTGQV
QPGFFFDGTP LLGQYYGIRQ KGQLVAVAGE RTKVTGMIEI SAVCTHPSFT GRGYAQQLVT
HIMDTNIAAG NALYLHFVNT NDRARNVYEL LGFKYRRPIV FWEIIRNS